KEGG   Chenopodium quinoa (quinoa): 110694691
Entry
110694691         CDS       T05764                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like isoform X1
  KO
K14962  COMPASS component SWD2
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110694691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110694691
   03036 Chromosome and associated proteins [BR:cqi03036]
    110694691
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110694691
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     110694691
    COMPASS/SET1 complex (yeast)
     110694691
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st KNTC1_N Beta-prop_DCAF4 HisKA_2 VPS11_N Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 110694691
NCBI-ProteinID: XP_021727548
UniProt: A0A803MHK4
LinkDB
Position
Unknown
AA seq 326 aa
MAEDKVSLDLTEETLQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESIRLYDVANA
TCLKTINSKKYGVELVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFKGHHDRVVS
LSLCARNEFFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFSIASGGYIRL
FDTRKYEKGPFEIYSVGGDFSDANVVKFSNDGRLMLLTTTNGFIHVLDSFRGTLLCSFNV
KPVSTSSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEKEPPVIKWAPGNV
MFATGSSELSFWVPDLSKLGTYAGRK
NT seq 981 nt   +upstreamnt  +downstreamnt
atggctgaagataaagtgtcgttggatttgacggaagaaactcttcagagcatggaagtc
ggcatggcgtttcgcgattatagtggaagaatcagttcaatggacttccataggacctca
agttacttggtcactgctagtgatgatgaatcgatccgcttgtatgatgtcgccaatgcc
acatgtttgaaaaccatcaatagcaagaagtatggagttgaacttgtgtgctttacttct
catcctacaacagtgatctactcgtcaaagaatggctgggatgagtcactgcggcttctc
tccttgaacgacaacaaatatttgcgatatttcaaaggtcatcatgatagggtcgtatcc
ctaagcttgtgtgctcgcaatgaattctttatatcaggttctctggaccggactgttctg
ctctgggaccaacgggctgaaaaatgtcagggtcttctacgtgtccagggaaggcctgca
acagcttatgacgatcaaggattagtcttttcgattgcttctggaggatatataagattg
tttgacactcgcaaatatgaaaagggcccttttgaaatatattctgttgggggagacttc
tctgatgccaatgtagtcaaattcagcaatgacgggagacttatgcttttaacaacaacc
aatggatttattcatgtgcttgattcattccgtggtacccttttatgctcatttaatgta
aaaccagtatctaccagctcgactttggaggcctcatttagccccgagggaatgtttgtc
atatcaggttcaggggatggcagtgtatatgcatggagtgtccgcagtggcaaagaggtg
gcaagttggatgagtaccgaaaaagaacctcctgtaataaaatgggcaccaggaaacgtc
atgtttgccactggatcctctgagctatctttttgggttcctgatttgtctaaactggga
acttacgcgggaagaaaatag

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