Chenopodium quinoa (quinoa): 110694837
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Entry
110694837 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110694837
Membrane trafficking [BR:
cqi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110694837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
110694837
NCBI-ProteinID:
XP_021727693
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
GYTHASSTSSQGINNDGLQGPRGEGLENFVATTNFSVVPSWQRFNDNNSYGNNQLCQETP
SGSTGSLETYKQTSQSNDNSNWAGGLSNFSAENNFQLFNHLKALQNEQPTQYPTGHYSSQ
NAAAVPQPLFSNAHMXSYTPSEGRSSAGRPPHALVTFGFGGKLVVMKDNNIGGFSALGSK
DSDGCFLSVLNLMEVVSLSKDPSCSETSAYSYFHXLCNQSFPGPLMXGNVGSKDMNKWID
DKISNSESLEMNYGKRQGSKLLLSLLKIACQHYGKLRSFGGDTGLKENDLPESAVAKLFA
SSKRSDGQFNVYNAISNCLMTLPSEAQIQTTATEVQNLLISGRKKEALQRAQDGHLWGFA
LILARELGDQLYADTVKKMAVSQLVVGSPLRTLCLLIARKPEEVFCNSTMPANDVYEAVN
MLPQSMQNAGFSMLENWEENLAVITANRTENDHLVIIHLGDCLLKEKHDVTAAHICYLVA
EAGFEQYSDSARLCLIGADHWNFPRTYASPEAIQMTELYEYAKVLGNSQFLLLQLQPYKL
IYAHILAEVGRISDSLKYCQAVYKSLKXGRSPEADTLKQLLSSLEERIRTHQQSGYAGNL
APAKIVGKLLNFIDNTAHRVVGGLPPPGPSSLTQSSYQGSENQFQTLGPKVTGSQSIMGV
SSLTPLASTNVTGSQSTMGLSSLTPSASMEPISQWAVDESKMTLQTRSISEPDIGKTKPD
QVDSSNEATSSSTVVKQSGSAGTSRFGRFNFGAQILQKTVGLVLKPLQGRQAKLGDTNKF
YYDEKLKRWVEEGAEPTPEESALPPPPTAAFQNGRSDYNLKNALNDGMHAINGDPPSSSS
TPESSPAIPSMPSSNQFSARSRMGVRSRYVDTFNKGGGASTNLFQAPSVPSAKPANLTGT
KFFIPMAAPTNEQPSGTDSGSGNEISLSGENSSSDPFQNLAPAPIGTMQRFSSVDTLPSK
GAMDSGISSLAPQSRRTASWSAVQSDTFSPPSTSEIKASPLSSMPGDQLLGNLHMDRDNS
GDDLQEVEL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
ggttatactcatgctagtagtactagtagtcagggcattaacaatgatgggctacaaggt
cccagaggtgaaggcctggaaaattttgttgctactaccaattttagtgtggttccgtcg
tggcaaagattcaatgataacaatagctacggtaacaatcaattgtgccaagagactccc
tctggttccacaggatctttggaaacatacaagcaaacaagtcagagtaatgataattct
aattgggctggtggcttgagcaatttttctgctgagaataattttcagctgtttaatcat
ctcaaggctctgcaaaatgagcagccaactcaatacccaactggtcattacagcagtcaa
aatgcagctgctgttccccaacccttattttctaatgctcacatgntctcttatacacca
agtgagggaaggtcatctgcaggtcggcctcctcatgctttagttacttttgggtttggg
gggaagcttgtagttatgaaagataataatattggtgggttttcagcacttggaagcaag
gatagtgatggatgcttcttatctgtgctcaatttgatggaagttgtgagtttgagcaag
gatccatcttgttctgagacaagtgcttatagctacttccatnntctttgtaatcagtcc
tttcctggtcctttaatgnntggtaatgtgggaagcaaagatatgaataaatggattgat
gacaagatatcaaacagtgaatctctggaaatgaattatggtaaacgtcaaggttcgaaa
ttgcttctttcattgctaaaaattgcttgtcaacactatggaaaacttcgatcctttggc
ggggatactgggctgaaggaaaatgaccttcccgaatcagccgttgccaaactcttcgca
tcttccaagaggagtgatggccagtttaatgtttataatgcaatttctaattgtttgatg
accttgccttctgaagcacaaattcagactactgctactgaggtacaaaaccttctgata
tctggtagaaagaaggaggctttgcaacgagctcaagacggtcacctctggggatttgct
ctaattcttgcccgagaacttggggatcagctttatgctgataccgtgaagaaaatggca
gttagccagttagtggttggctcacctttgagaactttgtgccttttgatagcaagaaaa
cctgaagaggttttctgtaacagcacgatgcctgctaatgacgtgtatgaagcagtaaat
atgttgccacagtctatgcagaatgcaggttttagcatgctggagaactgggaggaaaat
ttggctgtaataactgcaaatagaactgagaatgatcatcttgtgattatccatcttgga
gattgtctactgaaggaaaaacatgatgttactgctgcacatatctgctacttggttgca
gaggctggatttgagcagtattcagatagtgcaagattgtgtctcattggtgcagaccac
tggaacttcccaaggacgtatgctagtcctgaggcaattcagatgacagagctttatgaa
tatgcaaaggttcttgggaattctcagtttctcctgcttcaactgcagccatacaaactt
atatatgcgcacatactggctgaggttggaaggatttcggattcattaaaatactgtcaa
gctgtttacaaatctcttaaanttggacgatcaccggaggcagatacattgaaacagttg
ttgtcatctcttgaagagaggattaggactcaccagcagagtggatatgcaggtaactta
gctccagcaaagatagtgggtaaattgctgaactttattgataatactgctcatcgtgtt
gttggaggacttccgccacctggtccttcgtctttaacacaaagtagttatcaaggcagt
gaaaatcaatttcagacactgggccctaaggtgactggtagtcaatcaatcatgggtgtc
tcatcactgacaccattagcatccacgaatgtaacgggcagtcaatcaaccatgggtctg
tcgtcactgactccatcagcatccatggagcccataagccagtgggcagtagatgaaagt
aaaatgacattgcaaactagaagcatttctgagccagatattggtaaaactaagccggat
caggttgattcttcaaatgaagcaacttcttccagtacagtggtaaaacaatctggttca
gcaggaacatctcgctttggtcgttttaactttggtgctcagatcttgcaaaagactgtt
ggattggtcttaaagcctcttcaaggccgccaggctaagttgggggacacaaataaattc
tattacgacgaaaagctaaagaggtgggtggaggaaggtgctgaaccaactcctgaagaa
tctgctctgccaccaccaccgactgctgccttccaaaatggaaggtcagactataacttg
aagaatgctttgaatgatggaatgcatgccattaatggtgatccacctagtagtagttca
acccctgaaagcagccctgctataccatctatgcctagctcaaatcaattttcagcacgc
agtcggatgggtgtacgatcaaggtatgtggataccttcaacaagggtggcggggcctct
acaaatttgttccaggcaccatctgtaccatcagctaaacctgctaatctcactggcacc
aagtttttcattcccatggctgcaccgacaaatgaacagccttcaggcactgattctgga
agcggaaatgaaatttctctaagtggagaaaattcttctagtgatcctttccaaaaccta
gcacctgcacccattggaacaatgcagaggttttctagtgttgataccttacctagcaag
ggtgcaatggacagtgggataagctctcttgcacctcaatctcgtcgtacagcttcatgg
agtgcagttcaaagcgatacattctctccgccttcaacaagtgagattaaagcttcccca
ctttcgtctatgcctggtgatcagttgctgggtaatctgcacatggatagagacaattct
ggggatgacctccaggaggttgaactttga
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