Chenopodium quinoa (quinoa): 110695915
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Entry
110695915 CDS
T05764
Name
(RefSeq) nuclear pore complex protein NUP96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110695915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110695915
03036 Chromosome and associated proteins [BR:
cqi03036
]
110695915
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110695915
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110695915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
110695915
NCBI-ProteinID:
XP_021728839
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MEFDIFRDIQSSSTRPTFDCCSAFQISSPYKKRKTIWGVLNNGVLPVLRCSDYYTEPSMK
ELAALEGIKPGYCSKIRDFVVGRTGFGSVMFLGETDVRGLDLAEIVKFNRNEIVVYEDES
IKPDVGEGLNKPAVVSLILKFGKSGVDGGSFCGVVDRLRESSVKQGAEFMSYDPLSGEWK
FRVRHFSRFGLSLDDEDDIVMDDADDEPGHDHVEMDDDVGVGVGGGGEDEGLNSNGFDIG
QNEYELSHSLPAHLGLDPARMREMKMLMFSGDGDEDESYDDYPSHEKQSSQRDKFPLYNS
GLKVNFKPSPPPPRKTPVPLLEYKSNGFDVNAPGTLLLAQQTRSPLRVVKPEGFKLDPEQ
ETPVSGYHSRNIVDAGLFMGRSFRVGWGPNGVLIHSGVPVCSNDRQGVLSSVITLEKVAI
DKVTRDESNEVKKEAVDQLFQSPLELHKSLNHRFLEVEVGPFNLSLQKVVCDRFSLSDIC
RNYIEVVEKQLDVPGMSPSVRQSLMHQVIVWELIKVLFSEREASGKAVYGIEDNGEDMML
DGKAARPEVDPEALPLMRRAEFSYWLQDSVYHRVQEDMSCLSEGDDLQQIFLYLTGRQLD
DAVELAASRRDVRLACLLGEAGGSMVNRSDVAQQLELWRDNGMDFNFIEKDRIQLYELLS
GNIHSALANKSIDWKRFLGLLMWYELPPGTALPAVFHTYQHLLTEGKAPYPVPAYIDEGP
IEETVQVATEGRYDLAYYLMLLHASDNGNFAGLKSMFSAFASTNDPLDHHMIWHQHGILE
AIGAFSSSDLYILDMAYVSQLLCLGKCHWAIYVVLHMPFCEAFPYLHSTVIQEILFQYCE
TWSSQEEQRKFIEEMGVPSQWLHEALAVYFQYYGDLSKALEHYIKCSSWQKAHTIFITSV
VHSLFLSAKDSEIWRLATSMEDYKSEIEDWDLGAGIYISFYLLRSSLHGDQDDINKLDSL
ESKEAACREFFNCLNKSLEVLGIRLPTDARVAYSKMSEEISKLLVSDGGEDSRRETQLTC
FDTIAAAPIPEDHRSCHLQEAVLLFTTFLSETAT
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgatatttttcgtgatatacaatcttcctcaacaagacccacttttgattgt
tgttctgcatttcaaatttcatcaccatataagaaaaggaagacaatttggggtgtgtta
aataatggggttttaccagttttacgatgttctgattattatactgagccttcaatgaag
gaattagctgcattagaggggattaaacctgggtattgtagcaaaattagggattttgtt
gttgggagaactgggtttgggagtgtgatgtttttgggggaaactgatgtgagaggtttg
gatttggctgagattgttaagtttaataggaatgagattgttgtttatgaggatgagagt
attaagcctgatgttggggaaggtttgaataagcctgctgtggttagtttgatactcaag
tttggaaaatcgggtgtcgatggtgggagcttttgtggggttgttgataggttgagagag
agctcggttaagcagggcgcggagtttatgtcgtatgatccattgagtggggaatggaaa
tttagggttcggcattttagccgatttgggctgagtttggatgatgaggatgatattgtg
atggatgatgcggatgatgagccgggtcatgatcatgttgagatggatgacgatgttggt
gtaggtgtaggtggtggtggtgaggatgagggtttaaatagtaatgggtttgatattggc
cagaatgaatatgagctttctcattcgcttcctgctcatctagggcttgatcccgctaga
atgagagagatgaaaatgttgatgttttcgggtgatggtgatgaggatgaaagttatgat
gattatccgtcgcatgagaaacaatcgagtcagcgagataagtttccattatacaattca
ggattaaaggtgaattttaaaccaagtcctccgccacccaggaagactccagtgcctttg
cttgagtacaagtctaatggttttgatgtaaatgctcctgggactcttctattagcacaa
caaactagatcaccattgagggtcgttaaaccggaaggtttcaaattggaccccgagcaa
gaaacacctgtatctggttatcattcacgaaatatagttgatgctgggttgtttatgggc
cgatcatttcgtgttggatggggaccgaatggtgtccttattcatagtggtgtgcctgtc
tgtagtaatgatcgtcaaggagtattgtcttcagtaataactcttgaaaaggttgcaatc
gacaaggtcactagagatgaatcaaatgaagtgaaaaaggaagctgttgatcaactattt
cagtcacccttagaattacacaaatcgttgaatcataggtttcttgaagttgaagttggt
ccctttaatttaagccttcaaaaagttgtatgcgatcgtttttctctgtcagatatctgt
cgtaactatatagaggtagtcgagaagcaacttgacgttcctggtatgtcaccatctgtt
cgtcagtctttgatgcaccaagtgattgtatgggagctgattaaggttcttttctctgaa
agggaggctagtggaaaggccgtgtatggtatagaggacaatggcgaagatatgatgctg
gatgggaaagctgctcgcccagaagttgaccctgaagcactccctctgatgcggagggcg
gagtttagttattggctacaagatagtgtgtaccatcgggtacaagaagatatgagctgc
ttgagtgagggtgatgatttacaacagatctttctttacctgactggaagacagttagat
gatgctgtagaattggctgcttctaggagggatgtgaggctggcctgtttattaggggag
gctggtgggtctatggtgaatcgttccgatgtagctcagcagttggagctatggagagac
aatggcatggactttaacttcattgagaaggataggatacaactttatgaattgctttcg
ggtaacattcatagtgctttggctaataaaagcattgactggaaaaggtttttggggttg
ttgatgtggtatgaattaccacccggcactgccttgcctgctgtttttcacacttaccaa
catctccttactgaaggaaaggctccatatcctgttccagcttatattgatgagggacca
attgaggagactgttcaagttgcgacagagggacggtatgaccttgcttattatctgatg
ttgcttcatgctagtgacaatggtaattttgctggcctgaaatctatgttcagtgctttt
gcatcaactaacgatccacttgaccaccatatgatctggcatcaacatggaattcttgaa
gcaattggtgccttcagttctagtgatctttatattcttgacatggcatatgtttctcag
ctattgtgtctagggaaatgccactgggccatctatgtcgtcctacacatgcccttttgt
gaagcctttccttatctacactccacagttattcaggaaatcttgttccagtattgtgaa
acctggagttctcaagaagagcagcgcaaattcatagaagaaatgggtgttccatcacaa
tggttgcatgaggctttggctgtatattttcaatattatggtgatctttctaaggctcta
gagcactacataaaatgttccagttggcaaaaggctcatacaatcttcataacatcagtt
gttcattctttattcttgtcagccaaagactcagagatttggaggttggcaacgtcaatg
gaggattataagtcagagatagaagactgggacttgggagctggaatctatatctcattt
tatctgttgaggagctctcttcatggtgatcaagatgatataaacaaattggattctctt
gagagtaaagaagcagcttgtagggagttcttcaattgcttaaataagtctctagaagta
ttgggaatcagactacccacagacgcaagagtggcctactcaaagatgtcagaagagatc
agcaaattgcttgtatctgacggtggagaagattcaagacgtgaaactcagttgacctgc
tttgacaccatagctgctgctccaatccctgaagatcatcgctcttgtcatttacaggag
gcagtgttacttttcactacttttctttcagagacagccacataa
DBGET
integrated database retrieval system
