KEGG   Chenopodium quinoa (quinoa): 110696305
Entry
110696305         CDS       T05764                                 
Name
(RefSeq) DNA-directed RNA polymerase D subunit 2b-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110696305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cqi03021]
    110696305
Enzymes [BR:cqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110696305
Transcription machinery [BR:cqi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110696305
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 110696305
NCBI-ProteinID: XP_021729289
LinkDB
Position
Unknown
AA seq 1208 aa
MMGLVGKDSMDTSSNGKDGFDDIDPENWDDEGMYSSDEDADTMYMSLDDLGEASLTNFCK
KASSSFFKQYGLISHQINSYNSFVREGIKRVFDNIGEITVNPGYDPSKKVEGGWRYASVI
FGKFELERPMFWTGEKFQADGGKDYIKLLPRHARLQKMTYSARLKVETRLQIYTLEKVIS
DKFKTGKSEYIDRTILSDETTDVIIGRIPVMVKSDICWMSQAEKGDCEFDHGGYFIVKGA
EKVFIAQEQICLNRLWISSERFWRVAYRSEFRKRRLHVKLAENPKVENIRGGEKVISVYF
AFVEVPIWILFFALGVSSDKEVVELIDCSTDDGCISNILFASIHDADEKCDGFRRGGKAL
EHIDHLIKQSKFPPSESAAEYIETYLFPSLSRNKQKARFLGYMVKCLLQAFLGRRKCDNR
DDLRNRRLECASELLERELRVLMKQAEWRMVKAMQRDLYGNRDLQGIEHYLDASIVTNGL
NRAFSIGAWEHPYKRSNKVSGVSANLRRTNPLQSTCDMRRTRQHVAYTGKVGDARYPHPS
HWGKVCFLSTPDGENCGLVKNIAATGLVSCSISKKGLPDILVKCGMEKLVSDTCTSLGGK
DKVFVDGDWVGVCADSLSFVQELRRNRRKKRISSQVEIKRDVQNSEVRIFCDAGRILRPL
LVVENLKKTKLLKGDEFSFETLLDKGIIELIGPEEEEDCRAAWGIKFLFEDKGKDAVKYT
HCELDMSFLLGISCGIIPFANHDHAKRVLYQAQKHSGQAFGYSSTNPNIRVDTLSHQMYY
PQRPLFRSVISDCLGKPGYPLGRNQILPKVEFFSGQNCIVAVNVHLGYNQEDSLVMSRAS
LERGMFRTEHFRSYKAEVDNQESSENRRNFNDTVKFGKIQSKIGRADNLDDDGFPYIGAN
LQSGDIIIGRCAESGADHSVKLRHTEKGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDK
FSSMHGQKGVIGHLESQENFPFTKQGIVPDIVINPHSFPNRQTPGQLLEAALGKGIACGG
SLKYATPFSTPSVESITEQLHRAGFSRWGNERVYNGRTGEMIRTLLFMGPTFYQRLDHMS
EDRYKFRNTGPVLPLTRQPVLDKKRFGGIRFGEMERECLIAHGASANLHERLFTLSDASQ
MHVCRKCQNIANVILRTVPGGKKIRGPYCRFCESGEEIVKVNVPYGAKLLCQELFSMGIS
LRFDTKLC
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgatgggacttgtgggaaaagatagcatggacaccagcagtaacggtaaagatggattt
gatgatattgatccggagaactgggatgatgagggtatgtattcgtcagatgaagatgct
gatactatgtacatgagcttggatgaccttggtgaggcttcattgacgaacttttgcaag
aaagcatcgtcgtccttcttcaagcagtatggtcttatcagtcatcagataaactcctac
aacagttttgttcgtgaaggtataaagagagtgtttgataacattggtgagataacagtg
aatccaggctatgatccctcgaagaaggtagagggtggatggagatatgcttcggtgata
tttgggaaattcgagctcgaacgtcctatgttttggaccggagagaagtttcaagcagat
ggtgggaaagactatattaagttgcttccccgacatgcccgccttcagaagatgacttac
tctgctagattgaaagttgagactcgccttcagatatataccctagagaaggtcataagt
gacaagtttaaaactggtaagtcagagtatatagacagaactatattgagcgatgaaaca
acggatgtcatcattggaaggatccctgtgatggtgaagtctgatatatgctggatgagt
caagctgagaaaggcgattgtgaatttgatcatggagggtattttatagtcaagggtgct
gagaaggtatttattgctcaagaacaaatctgcttgaataggctttggatttctagtgaa
cgcttttggagggttgcttatcgatctgagttcaggaagagaaggttacatgtcaaatta
gcagagaatccaaaagttgaaaacatccgaggaggagaaaaagttatcagtgtgtacttt
gcgtttgtagaagtccctatttggatactcttttttgcactcggtgtatcatctgacaaa
gaggtggtggagttaattgattgcagcacagatgatggctgcatcagtaacatcctcttt
gcatccattcatgatgctgatgagaaatgtgatggattccgtcgtggtggcaaagctttg
gagcatattgaccatttaataaaacaatctaaattccctccgtctgagtctgctgcagaa
tatatcgaaacataccttttccctagtctttctaggaacaagcagaaggcccgatttctt
ggatacatggtgaaatgtcttttgcaagcatttttaggcaggagaaagtgtgataataga
gatgatttgagaaatagaagactagagtgtgcttctgagcttctagagagggaacttagg
gtccttatgaagcaggctgagtggcgaatggtgaaggcaatgcagcgagacttgtatgga
aaccgtgatctgcagggtatcgagcattacttggatgcatcaatagtcaccaatggtctt
aacagagcattttccattggtgcatgggagcatccttacaagagatcaaacaaggtttct
ggtgtgtctgcaaatctcaggcgaactaatccgttgcagagtacttgtgatatgaggaga
actcgtcagcatgttgcttacacagggaaggttggagatgccagatacccacacccttca
cactggggaaaggtatgcttcttgtctacgccggatggcgagaactgtggtcttgtgaag
aacatagctgctactggacttgtaagttgcagtattagcaagaagggcctgcctgatatt
ttggtgaagtgtgggatggaaaaattagtgagcgacacttgtacttcgctgggtggaaag
gacaaggtttttgtggatggtgattgggtaggagtatgtgctgattccctctcctttgtt
caggagttgagaagaaatcgtaggaagaagcgtatatcaagccaggttgaaatcaaacgt
gatgttcaaaattctgaagtgcgaatattctgtgatgctggaagaatacttcgaccactt
ttagtagttgaaaatttaaagaagacaaagttactgaaaggggatgaattttcttttgag
acccttctagacaaaggaataattgaattgattgggcctgaagaggaagaagattgtcgc
gctgcttggggaattaagttcctctttgaagacaagggaaaagacgctgtcaaatacact
cactgtgagcttgatatgtcatttttgttgggaatcagttgtggtattatcccctttgca
aatcatgatcatgctaagagggttctttaccaagctcagaagcattctggacaagccttt
ggatattccagcacaaacccgaatataagagtagataccttatcccaccaaatgtactac
cctcaaagacctctcttccgttcagtgatttctgattgtctaggaaagccaggatatcca
ttaggccgcaaccagatacttccaaaggtggagtttttcagtggtcaaaattgcattgtg
gctgtaaatgtccatcttggttataatcaagaagattctttggtcatgagtcgagcttcc
ctggaacgaggcatgtttaggaccgagcattttaggagttacaaggctgaagttgacaac
caagagtcatcagaaaataggaggaattttaatgatactgttaagtttgggaagatacag
agcaaaataggacgggctgacaaccttgatgatgatggatttccatacattggagcaaac
ttgcagagtggagatattatcattggcaggtgcgcggaatctggggctgatcatagtgtc
aagctaaggcatacagaaaaaggcatggtgcagaaagttgtcctgtcagcaaatgatgat
gggaagaactttgcagttgtttcacttagacaggtccgttcaccttgtcttggtgacaag
ttttcgtcgatgcacggccaaaagggtgttattggacatcttgagtcacaggagaatttt
ccgttcacaaaacaagggatagtgcctgatatagtaatcaatcctcattcatttcccaat
agacagactcctggccaactactggaggctgcccttgggaagggtattgcatgtggtggt
tcattgaaatacgccaccccattctctactccctctgtcgaatccataacggagcagctt
cacagggctggattctcaagatgggggaatgaaagggtctataatggaagaacaggagag
atgatccgtaccctcttattcatggggcccactttctatcagcgtctggaccatatgtct
gaggacagatataagtttcgaaatacaggtcccgtacttccactgacccggcagccagtg
ctagacaagaaacggtttgggggaatcaggtttggggagatggaacgggaatgtctgatc
gcccatggtgcttcagccaacctgcatgagcgccttttcactctaagtgacgcgtcccag
atgcatgtttgcaggaaatgccagaacattgctaatgtgatcctaaggacagtccctggt
ggcaaaaagatcagagggccttactgcaggttctgtgaatctggtgaagaaatcgtgaag
gtgaatgtgccatatggggctaagttgttgtgtcaagagctcttcagcatgggtatttcg
cttcgttttgacaccaaactctgctga

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