Chenopodium quinoa (quinoa): 110696495
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Entry
110696495 CDS
T05764
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110696495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110696495
Spliceosome [BR:
cqi03041
]
Complex A
U1 snRNP components
U1 related factors
110696495
Complex B
110696495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
110696495
NCBI-ProteinID:
XP_021729479
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MGTAQNYGPPMSTQYRPAVPGQQGQPYLPGSSQQFLAPGQNMPSGPNQPMQFSQPMQYSQ
PMQQLSHRPGMPGGPMSSQGMNLPYGQPNRPMNLGAQQNQHSAPPFGNHASGVGGMGAPF
SSSYTFQPVSHLSAPAAPAPVGSQPWLSSGSQSSVPFVPVPQTADQSSVSAAAVPAVNPS
DTSQQSSSDWQEHNTSDGRRYYYNKKTKQSSWEKPLELMTPTERADASTVWKEFTTPEGK
KYYYNKVTKESKWTIPEDLKLAREQAEKEFGQGDTGLISQPAATVSLTSEEASPAAPVLA
SSNGLLSASGVSSNPLSFPPAVNPLPVVNVASSEPSVEHSVAPTSLAVTNPPAVTPLSAS
ISGDAVLPAALNASSVTVSASDRASSQEISTSADGGSVHDLQEARKGMAAAVKVDLSEKP
TNDEPLVFANKQEAKNAFKLLLESANVQSDWSWDQAMRVIVNDKRYGALKTLGERKQAFN
EYLGQRKKQEAEERRLRQKKAKEEFTKMLEESEVLTSSMKWSKAITMFEDDERFKAVEKP
KDRQELFENYLVELQKKEKEKADEEYRRNREDYWKYLESCDFIEANSLWRKVQDRLEDDE
RCSRLEKIDRLEIFQDYIRYLEKEEEEQKKLQKEQLRRAERKNRDEFRKMLEDDVAAGVL
TAKSIWRDYCAKVKESPAYLAVARNISGSTPKDLFEDVVDELENQYHDDKSRIKDAMKLS
KITMTSTWTFEEFKSSISPELGSPPISDVNLKLVFEEQLERIKEKEEKEAKKRQRLLDDF
TDLLRSLKEVTVSSTWEDSRQLFEESEEYREIGNETLVKETFEDYIAYLQEKAREKERKR
EEEKVKKEKEREEKEKRKEKEKEKKDKDKDRDREKRKERSKKEESDDEAVDATDSYSNKD
ENRKEKDKDRERKHRKRHHDTTDDVSSDREDDRDRRHRKRHHDTTDDVSSDRDDKEEHKK
SRRHGSDRKKSRKHEHSPDSDGESRQKKHKRDHQEGSRKNGAHDDLEDGELGEDGEIS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgcacaaaactatggccctcctatgtctacacagtatcgtcctgcagtcccg
ggtcagcaagggcagccatatttaccggggtcttcgcaacagtttctagcacctggacag
aatatgccttctggtccaaatcaacctatgcagttctctcaacccatgcaatactctcaa
ccaatgcagcagttatcacatagacctggaatgccgggtggtcctatgtcgtcacaaggt
atgaatttgccatatggtcaaccaaacaggcctatgaatttgggtgcgcagcagaatcag
cattctgctccgccttttggcaatcacgcctctggtgtaggtggcatgggagctcctttt
tcgtcgtcatatacatttcaaccagtatcccatttgtcagcacctgcggcaccagcacca
gttggcagtcaaccatggttatcatctggaagtcaaagctctgtgccttttgtaccggtt
ccacaaaccgcagaccagtcttcagtttctgctgctgctgttcctgctgtcaacccttcg
gatacaagtcaacagtcttcttccgattggcaagagcacaacacttctgatggaagaagg
tattattataacaagaaaactaagcagtctagctgggagaagccattagagttgatgact
ccaacagagagagctgatgcgtcaactgtgtggaaggagttcactacaccagaagggaag
aagtattactataacaaggttacaaaggaatcaaaatggactataccagaagatttgaag
ttggctcgtgagcaagctgaaaaagaatttggtcagggagatactgggctgatatctcaa
cccgcggcaacagtaagtctgacttctgaggaagcatctccagctgctccagttttggcc
agctccaatggtttattatctgcttctggtgtaagttcgaatccattaagtttcccacca
gctgtcaacccattacctgtagttaatgttgcgtcatcagaaccctctgtggagcattcc
gttgctccaaccagcttggcagtaacaaatcctcctgcagtgactcctctatctgcttct
atttctggagatgctgttcttcctgctgccttaaatgcatcctctgtaacagtgagtgct
tcagacagagcatcatctcaggaaatttcaacctcggcagatggaggttctgtgcatgat
cttcaggaagcacggaaagggatggcagctgcagtcaaagttgatttgagtgagaaacca
accaatgatgagcctttggtttttgccaacaagcaggaagcaaaaaatgcatttaagttg
cttcttgagtctgcaaatgttcagtctgactggtcctgggatcaggctatgagggtgata
gtcaatgacaagaggtatggtgctttgaagacattaggagagcggaagcaagcttttaac
gagtatctgggacagcggaagaaacaggaggctgaggagcgacgcttgaggcaaaagaaa
gcaaaggaagagtttacaaaaatgttggaagagtcagaggtactgacatcatctatgaaa
tggagtaaagctattaccatgtttgaagatgatgaacgtttcaaagctgttgaaaagccc
aaagatcggcaggaactttttgaaaattatttggtggaactccaaaaaaaggaaaaggag
aaggctgatgaagagtataggcggaatagggaagactactggaagtatctggaatcttgt
gactttattgaggcaaacagtctatggagaaaagttcaggaccgcttggaggatgacgag
agatgttcacgccttgaaaagattgaccgcttagaaatattccaggattacattcgttac
ttggagaaggaagaagaggagcagaagaagcttcagaaggaacaactgaggagagcagaa
cgaaaaaatcgtgatgaatttcgcaagatgttggaggatgatgttgcagctggtgttctc
actgcaaaatcaatctggcgcgattattgtgctaaagtcaaagaatctcctgcttatctt
gctgtggcacgtaacatatcagggtcaactccaaaagatttgtttgaggacgtggttgat
gagctggagaaccagtatcatgacgacaaaagtagaataaaagatgctatgaagttgagc
aagattactatgacttcgacatggacctttgaggaatttaagtcatctatttctccagag
cttgggtctccaccaatttcggatgtcaatttgaagctggtttttgaagagcagcttgag
aggataaaggaaaaggaagagaaagaagctaagaagcgccagcgtcttctagatgacttc
actgatttattgcggtctcttaaggaagtaactgtatcttctacttgggaagattctaga
caactctttgaagaaagtgaagagtacagagaaattgggaatgaaacattggtgaaggag
acctttgaggactatattgcttacctgcaagagaaggcaagagagaaagaacgaaagcgt
gaggaagaaaaggtgaaaaaggagaaagaaagagaggaaaaggagaaaaggaaggagaag
gagaaggagaagaaggataaagataaagatcgtgacagagaaaagcgaaaagagcgctct
aagaaagaggagtcagatgatgaagctgtggatgcaactgatagctatagcaataaggat
gagaataggaaagagaaggataaagacagagagaggaagcatagaaaacggcaccatgat
actactgatgatgtaagttctgacagagaagacgacagggatagacgtcaccgaaagcgg
caccatgacaccactgatgatgtcagttctgacagagatgataaagaggagcacaaaaaa
tcccgccgacatggcagtgatcgaaaaaaatctcgaaagcatgaacactcacctgattca
gatggtgaaagtagacagaaaaagcacaagagggatcaccaggaaggttctcggaaaaat
ggtgcccatgatgatctcgaagatggtgaacttggtgaagatggggaaatctcgtag
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