Chenopodium quinoa (quinoa): 110696665
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Entry
110696665 CDS
T05764
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110696665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110696665
03041 Spliceosome [BR:
cqi03041
]
110696665
03036 Chromosome and associated proteins [BR:
cqi03036
]
110696665
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110696665
Spliceosome [BR:
cqi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110696665
Complex B
110696665
Complex C
U2 SnRNP specific factors
110696665
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110696665
TFTC complex
110696665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110696665
NCBI-ProteinID:
XP_021729713
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MYLYSLTLQKPTGIVCAINGNFSGGKVQEIVVARGKVLDLLRPDDSGKIQTLLSVDIFGA
IRSLAQFRLTGSHKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTITYSICGVDCGFDNPI
FAAVEMDYSEADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHLDVRALIPRRLDLPAERGVLIVSAATHKQKSMFFFLLQ
TEYGDIFKVTLEYGNEGVSELKIKYFDTIPVTSSLCVLKSGFLFAASEFGNHALYQFQAI
GDEPDVESSSARMMELETDEGFQPVFFQPRRLKNLLRVDQVQSLMPVMDMKVFNLFEEET
PQIFTLCGQGSRSSLRVLRPGLGITEMATSPLPGVPNAVWTVKKNVNDEFDAYIVVSFAS
VTLVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPG
KRTIVKVGYNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMPGDVACLDIAPVPEGRQR
SRFLAVGSYDNTIRILSLDPDDCMQVLSLQSVFSPPESLLFLEIQASTGGEDGADHPASL
FLNAGLQNGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGY
IYQGHFLLTPLTCGTLEFAASFSSDQCAEGVVAVAAEALKVFTIERLGETFNETAIPLRY
TPRKFVLQPKRKLLVTIESDQRALTAEEREAAQKECFGAGLDENGNIEMENGDEDEDNQL
SDEQYGYPKAEKEKWVSCIRVLDPRTEETTCCLELQDNEAAFSICTVNFHDKEYGTLLAV
GTAKSLQFFPKRSFEAAYIHIYRFVDGGKLELLHKTQVEGVPLALSQFQGRLLAGIGPVL
RLYDLGKKKLLRKCENKLFPNTIITIHTYRDRIYVGDIQESFHYCKYRRDENQLYIFADD
VYPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGRLNGAPN
KVEEIVQFHVGDVVSSLQKASLIPGGGECIIYGTVMGSLGAFLPFTSRDDVDFFSHLEMH
LRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPAEILKK
LEEIRNKII
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtttaacccttcaaaaacccactggcattgtttgcgccattaatgga
aacttctccggtggtaaggttcaagaaattgttgtagcaagaggcaaagttcttgatctt
cttcgccctgatgacagtggtaagattcaaaccctactttctgttgatatttttggtgct
attcgttctttagctcaatttagacttactggttcgcacaaagattatattgttgtcggt
tccgattcgggtcgaattgtgatattagaatataataaagagaagaatgtgtttgataag
gttcaccaggagacgtttgggaaatcgggttgtcgtcggattgttccgggacagtacttg
gcggttgatccgaaagggagggctgttatgattggggcttgtgaaaagcagaagcttgtt
tatgttttgaatagggatactgctgctaggttgacgatttcgtctcctttagaggctcat
aagtcgcatacgattacgtattcgatttgtggggttgattgtggctttgataaccctata
ttcgcggccgttgagatggattattcggaggctgatcaggattctaccggccaagctgcg
gccgaggctcaaaaacatcttactttttatgagcttgatttgggtcttaaccatgtttct
aggaagtggtcagaacctgttgataatggtgctaatatgcttgttacagtgcctggtggt
ggggatgggcctagtggtgttttagtttgtgctgagaattttgtgatttataaaaatcaa
gggcatctggatgttcgggctttgattcctaggagattggatttgcctgctgaacgtggg
gtgttgattgtgtctgctgcaactcacaagcagaaatcaatgttcttctttttgcttcag
acggagtatggtgatatttttaaggtcactttggagtatggcaatgagggtgtatccgaa
ttgaagataaagtattttgatacaatccctgtaacgtcttcattatgtgtgttaaagtct
ggtttcttatttgctgcatctgaatttggtaatcatgctctttatcagtttcaagctatt
ggagatgaacctgatgtagaatcttcttctgctaggatgatggaattggaaaccgatgaa
ggtttccagccggtgttcttccaacctaggaggcttaagaaccttcttagggttgaccag
gttcagagtttgatgccggtaatggacatgaaagtgtttaatctttttgaggaagagact
ccccagatttttactctgtgtggacaaggttctcgttcctctttaagggttttaaggcct
ggtttgggaattactgagatggctacctctccacttcctggtgtgccaaatgcagtttgg
acagtgaaaaagaatgttaatgatgaatttgatgcctatattgtggtttcatttgctagt
gttactcttgtactctcaattggtgagacagttgaagaagttagtgacagtggattccta
gataccaccccttctcttgctgtatctttgattggtgatgattctctcatgcaagtccac
cctagtggtattaggcacattagggaagatggtcgtatcaatgagtggagaacccctgga
aagaggaccatagttaaggttgggtacaacaggcttcaagttgttattgcactcagcgga
ggagagcttatctactttgaggtggatatgactggtcagttgatggaagtggagaaacat
gaaatgcctggagatgtggcttgtttggacattgctccagtcccggaagggagacagaga
tctcgatttcttgcagttggttcctatgataatactattcgtatcttgtctctggatcca
gatgattgtatgcaagtgttgagtttgcagagtgttttttcgccccctgaatccttactg
tttctcgagattcaggcatcaactggaggtgaggacggtgctgatcatcctgccagtctt
ttcctcaatgctggtttgcagaatggtgtattgtttaggacagttgtagacatggttaca
ggtcaactctctgattctcgttctcggtttttggggctcagagccccaaaacttttttca
atcatagtgcgaggtcgacgtgctatgctttgcttgtcaagccgtccttggcttgggtac
atatatcagggacacttccttttgacacccctgacatgtggtacacttgaatttgcggcc
tcattttcatctgatcagtgtgcagaaggtgtagttgccgttgctgctgaggctttaaag
gtgtttactattgagaggcttggtgagacatttaatgaaactgcaatccctttaaggtac
actccacgaaagtttgtgcttcagcctaagcggaagttgctggtcacgattgagagcgat
cagcgagcattaactgctgaagaacgtgaggctgcacagaaagaatgctttggtgctggg
ttggatgagaatggtaacattgaaatggaaaatggtgatgaagacgaagataatcagctc
tctgatgagcagtatggttatccaaaagcagagaaagagaaatgggtttcttgcatcagg
gttcttgatccgagaacagaggaaactacttgctgcctagagcttcaggataatgaggct
gcatttagtatatgcacagtaaatttccatgacaaggagtatgggaccctactagctgtt
ggtactgcaaagtcattgcagtttttccctaaaagatcgtttgaggctgcatatattcat
atttatcgatttgttgatggtggaaaacttgaacttttgcacaaaacccaagtagaaggt
gttccattggctttatcccaatttcagggaagattacttgcaggaataggacctgtgctc
aggctgtatgacttgggcaagaagaaactactaagaaaatgtgagaataagctgtttccc
aacacaattattactatacacacttaccgtgatcgtatttatgtgggtgatatccaagag
tcattccattattgcaagtatagacgggatgagaaccagctctacatatttgctgatgat
gtttaccctagatggctcactgcgtcacaccatgttgattttgacacaatggctggtgca
gacaaatttgggaatgtatattttgttcggctacctcaggatgtctctgacgaaattgaa
gaggaccctactggtgggaaaataaaatgggaacagggtagattaaatggagcacctaac
aaggtggaggagatagttcagtttcatgttggtgatgttgtatctagtctgcagaaggca
tcactcatacctggcggtggagaatgcattatttatggcactgtaatggggagcttggga
gcatttcttcctttcacatcccgtgatgatgttgacttcttttcgcacttggaaatgcat
ttgaggcaggagcacccacctctgtgtggcagagatcatatggcatatagatctgcatat
tttcctgttaaggatgtgattgatggagatctgtgcgaacagtttccaactttacctatg
gatatgcagaggaagattgcagatgaattggacagaactcctgcagagattctaaagaaa
ctggaagagattcgaaataagattatttga
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integrated database retrieval system
