Chenopodium quinoa (quinoa): 110696827
Help
Entry
110696827 CDS
T05764
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110696827
Membrane trafficking [BR:
cqi04131
]
Protein recycling
Others
EARP complex
110696827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Osteoregulin
Motif
Other DBs
NCBI-GeneID:
110696827
NCBI-ProteinID:
XP_021729849
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MQPGIGASSSSSSSPFSLSPLPFIYSFNGELSNTSVEGFDSSRVFFLASLWLFRGVGGGG
SSGGSMDFSKVGEKILSSVRSARSLGFLPAASDRPEVPARAEAAAAVARALATLPPDQRL
SLPSSSAELSSMYGSRSHDPVAEELEEEFYEEDFDPVMFVLEHIPSEDDELEHYETKATV
RLAQLEKISAHLSRHVMEHHEEMVRGMQLVRELEKDLKIATVICMNGRRHLTSSMHEVSR
DLVVTESSRKKQVLLDVLPVLTEILHALDMQKELETLVEEGNFCKAFQVLSEYLQLLDSL
TELSAIQEMSRSVEVWLGNTLQKLDSLLLQVCQDFKEEKYVTVVDAYALIGDVSGLAEKI
QSFFMQEVLSETHSVLKTTVQEDLDTDSLQYSSRLTYSDLCLQIPESKFRQCLLRTLAVL
FRLMCSYHAIMSFQTENEFPVSRVQDNSNEQFDNSQKPVEVQSMSLGSGAYEYRVDNGSS
VAAAEMLERSSTGEYASSSTDASGTNGSLPENSNDLSNLPLDDDAVSNSGSPWYELRRDA
TALVSQSLQRGCKNFWQLMTSRVSVLLSSAAFCSTSIHQFLKNYEDLNVYVLAGESFCGA
EASEFRKKLKAACENYFSNFHKQNIYALKMVLEKESWQKLPRDAIQVVSFAGLVGDGAPL
ISSLDFGSMNAGLHQSNKLVPSGEFGSRKSGFSHWIKTGNPFLTKVSSPTNCHTSSPFVD
GTSGSVEPDNSATGSDTTEKVTHVEININHSNGRASILDDENEDLLADFIDEDSQLPSRI
SKPHLPRNHSSQWRDDEAAAQTGSSLCLLRFMDKYARLMQKLEIVNVELFKGLCQFFEIY
YYFVFDTFGHQDSCANGRGDAETLNHRLKTAVNRITQDCEQWLKPNLHYSSISMPVSLNS
SSKNMDLTPTVPPGTNFGQSPGLKETCAAVDTVSLVASILRRSKAHLQSMLLQNNPTVVE
DFFVFLVDSVPDLTEHIYRSTARLLLHINGYVERIANAKWEVKELGMEHNGYVDLLLGEF
KHYRTRLAHAGIHKEQVQELLLEYGVEIVAETLVEGLSRVKRCTDEGRALMSLDLQVLIN
GLQHFVSKDVKPKMHIVETFIKAYYLPETEYVYWARAHPEYTKSQVVGLVNLVATMKSWK
RKTRLEVIEKIESSA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaggaattggagcatcttcatcatcttcatcatcgccattttcgttgagtcct
ttacctttcatttacagttttaatggcgaattaagcaatacctccgttgaaggtttcgac
agttctagggtttttttcttggcttctttgtggttgtttcgaggcgttggcggtggtggc
agcagtggtggttcaatggatttttctaaggttggagagaagattctgagctcggttcgc
tctgctcggtctcttggttttctaccggcggcatccgatcgtcccgaggttcctgccagg
gcagaagcagcagcagctgttgctcgagctcttgcaactctgccccctgatcagaggtta
agtctcccatcaagttcggccgaactgagttccatgtacggaagcagatctcatgatcca
gttgctgaggaattagaagaagaattttatgaagaggattttgatccagttatgtttgtt
ctggagcatattccctcagaagacgatgagttggaacattacgaaaccaaggctactgtt
aggctagcccaactggagaaaatatctgcacatttatcccgccatgtcatggagcatcat
gaagaaatggtaaggggtatgcagttggtcagagaattggagaaggacttgaagattgcc
accgtgatctgcatgaatgggaggaggcacctaacttcttctatgcatgaggtttcaagg
gatctcgttgttacagaaagttcaagaaagaagcaagttctcttggatgtgcttccagta
ttaacagaaatcctccatgctctggacatgcagaaagagcttgaaacgctcgttgaggaa
gggaatttctgtaaggcatttcaagtactttctgaatatttgcagcttctagattctctt
acagagctttcagctatacaagaaatgagtcgcagtgttgaggtttggttggggaacact
cttcagaagctggattctttattgttacaagtttgccaggatttcaaagaggagaaatat
gtaactgtggttgatgcttatgcattgattggggatgtgtctggtcttgctgaaaagata
cagagctttttcatgcaggaagtcctttcagagactcattctgtactaaagactacagtt
caagaggatctggatacagacagtcttcaatatagttcgagacttacctacagcgaccta
tgtctccagataccagaatctaagttccgacagtgtctgctaagaacactagctgtactt
tttaggctgatgtgctcttatcatgctataatgagtttccagacagagaacgagtttcct
gtttccagggtgcaagataactcgaatgagcaatttgataattctcagaaaccagtagag
gttcaatcaatgagtttaggttcaggagcttatgagtatagagtagataatggatcttca
gttgccgctgctgagatgttggaacgttcttctactggtgaatatgcaagcagttctact
gatgcttctggtactaatggctcccttcctgaaaattccaacgacttgtctaatttgcca
ctggatgatgatgctgtgtccaatagtggatctccttggtatgaactgcgaagggatgca
acagctcttgtttctcagtctcttcagaggggatgtaaaaatttttggcagcttatgaca
agtcgtgtatcagtattgctttcatcagctgcattttgttcaacaagcattcaccaattt
ctcaaaaattatgaggatttaaatgtatatgttttagctggggaatcattctgtggtgct
gaagcttctgagttcaggaaaaaactgaaggctgcatgtgaaaattactttagtaacttt
cataagcagaatatatatgcattaaagatggttttggaaaaggaaagttggcagaaattg
cctcgtgatgctattcaagttgtcagttttgctggtcttgttggtgatggagcaccttta
atttcttccttagattttggctcaatgaatgctgggctacatcaatctaacaaattagtg
ccttctggtgaatttgggtctcgaaagagtggattttctcattggattaaaactggaaac
cctttcttaacgaaagtttcctctcctacaaactgtcatacatcatctccatttgttgac
ggaacatcaggttctgtagaacctgataattcagctactggatctgatactactgagaag
gttactcatgttgaaattaacataaatcattccaatggtcgggcttctattctagatgat
gaaaacgaagatcttcttgctgacttcattgatgaagatagtcaactccctagccgaata
tctaagccccaccttccgcgcaatcactcttcacaatggagagatgatgaggctgcagca
caaacaggatcttcactttgtctcttgaggttcatggacaaatatgctaggcttatgcag
aagttagaaattgttaatgttgaattattcaagggattatgccaattttttgagatctat
tattactttgtctttgacacatttggccatcaagacagctgtgcaaacggaagaggtgat
gccgagactcttaatcatcgtctgaagacagctgttaacagaataactcaagactgtgaa
caatggttaaagcctaatctgcattattcttcaatatcgatgcctgtgtctctaaattca
tcatccaaaaacatggatcttacacctacagttcctcctggcacaaatttcggccaatct
ccaggactcaaggaaacttgtgcagctgttgatacagtatctcttgttgcgagcatattg
cgtaggtcaaaggctcatcttcagtccatgcttttgcaaaataatccaactgtagttgaa
gatttttttgtgtttctggttgattctgttccggacctcacagagcacatctatagatca
actgcaagattgcttcttcacatcaatgggtatgttgagcgtatcgccaatgctaaatgg
gaagttaaagagcttggaatggagcacaatggttatgttgatttgcttttgggagagttc
aaacactacaggacaaggcttgctcatgcgggaattcacaaggagcaggttcaagagctt
cttttggaatatggtgttgaaattgtagcagagacacttgttgagggactatcacgtgta
aaaaggtgtactgatgaaggccgagctctaatgtcattggatctacaggtgttaattaat
ggacttcaacactttgtgtcaaaagatgtaaaaccaaaaatgcacatagttgagacattc
attaaggcatactaccttccagaaactgagtatgtttactgggctcgtgcacacccggaa
tatactaaaagtcaagttgtcgggttagttaaccttgtagcaactatgaaaagttggaag
agaaaaacgagactggaagttattgagaagatagagtcgtctgcatga
DBGET
integrated database retrieval system