Chenopodium quinoa (quinoa): 110698411
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Entry
110698411 CDS
T05764
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110698411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110698411
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110698411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF2465
ATG17_like
Motif
Other DBs
NCBI-GeneID:
110698411
NCBI-ProteinID:
XP_021731523
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MDDDLHFLDQNKLPELKLDAKQAQGFLSFFKTLPQDSRAVRFFDRRDYLTAHGENAAFVA
KTYYHTTTALRQLGNGSDSLSSVTVSKSMFETIARDLLLERTDHTIELYEGSGSNWRLVK
RGSPGNLGSFEDILFANNEMQDSPATVALLPNFRENGCTIGLGYIDLTKRVVGLAEFLDD
SHFTNVESALVGLGCRECLLPVDVAKSTEGRGLLDALSRCGVMVTERKKTEFKARDLVPD
LGRLVKGSIEPVRDLVSGLEIAPAALGALLSYAELLSDETNYGNFTIKPYNLDSCMRLDS
AAMRALNVMESKNDANKNFSLFGLMNSTCTAGMGKRLLHMWLKQPLLDVNEINDRLNLVQ
AFVEDIELRQELRQHLKRISDIDRLTRNLQKKKAGLLHVVKLYQSSIRLPYIKSALEKYE
GQFSALIKERFLEPLGIFSDDDHLNKFVALVETSVDLDQLENGEYMISSGYDSRLHELKE
EQESLESNIDSLHKKTADDLDLTDKVLKLEKGTQFGHVFRITKKEEPKIRKKLTTQFIVL
ETRKDGVKFTNSKLKKLGDQYQRILEEYKNCQKELVQRVVQTAATFSEVFESLAALLAEL
DVLLGFADLATSCPTPYTRPDITPSDVGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGQS
WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRATISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVDVIKAPTLFAT
HFHELTALAHDNREGEPSNKKIIGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVSLAREKAAELEDFSPATINAVDLSKKVGHKRKREFDSDAVSQGAARAHQ
FLKEFAELPLEQMDLKQALDHVNKMKSDLEKDSENCHWLKQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatttgcattttctcgatcaaaataaactccctgaacttaagctcgatgca
aagcaggctcaagggtttctgtcatttttcaaaaccctacctcaggattctcgagctgtt
cggtttttcgatcgtcgggattatcttactgcccatggagaaaatgcagcttttgtcgca
aaaacttattaccacactaccactgcccttagacaattaggtaatggttctgatagctta
tccagcgtaactgtgagtaaaagcatgttcgaaacaattgctcgtgatttactcttagaa
aggacagaccacacaattgagctttatgagggtagtggctctaattggaggcttgtgaag
cgcgggagtccaggaaacttaggaagttttgaggacattctatttgcaaataatgaaatg
caagattctcctgcaactgttgcattgttaccaaacttcagggaaaatggttgtactatt
ggattgggttacattgaccttaccaagagagtggttggtttggctgaatttcttgatgat
agccacttcacaaatgtggaatcagctctggtagggcttggttgcagggaatgccttctc
ccagtggatgttgctaagtctactgaaggaagggggttgcttgatgcattatcaagatgt
ggtgtgatggtaactgaaaggaaaaaaactgagtttaaggcaagggatttggtgccagat
cttggaaggcttgtaaaaggttcaattgagccagttcgtgatctagtttcaggacttgaa
attgctcctgctgctttgggagccttattatcttatgcagaattgctttcagatgaaacc
aattatggaaattttactattaagccatataatcttgacagttgcatgaggttagactct
gctgctatgagagcattaaatgttatggagagcaaaaatgatgctaacaaaaattttagc
ttatttggtctgatgaatagtacctgtactgccggaatgggaaaacggttgcttcacatg
tggctgaaacagcctttattggatgttaatgaaataaacgatcggctgaacttggtgcaa
gcttttgtggaggatatagaacttcgtcaggagcttagacaacatctaaaaagaatatct
gatatagatagattaacacgcaatcttcagaagaaaaaagctggtttgcttcatgttgta
aagctttatcagtcaagcataagacttccgtatattaaaagtgctcttgagaaatatgaa
gggcaattctcagcactgatcaaggaaaggtttttggagccccttggaatatttagtgat
gatgatcacctaaacaagtttgtggcccttgttgagacttctgttgatcttgatcaactt
gagaatggtgaatatatgatctcatctggttatgattcaaggcttcatgaactgaaagag
gaacaagagtcacttgagagcaatatagatagtcttcataaaaaaactgctgatgatctt
gatctcactgataaagttctaaagctagaaaagggtacacaatttggacatgtatttaga
ataacaaagaaggaggaaccaaaaattagaaaaaagcttactacacagtttattgtacta
gaaacacgaaaggatggtgtcaaatttacaaattcaaaactcaaaaaattaggggatcag
tatcaaaggatacttgaagagtacaaaaattgccaaaaggaactagtacagcgagtggtt
cagactgctgctacattttctgaggtatttgagtctttagccgcattgctagctgaactt
gatgttttgcttggttttgctgacttggctacaagctgtcctactccctatactagacca
gacataactccatcagatgttggagatatcatattagaaggaagtagacacccctgtgtc
gaagcacaggattgggtgaatttcataccaaatgactgtaaacttgtcagaggacaaagc
tggttccaaatcatcactgggccgaatatgggcggaaagtccactttcatcagacaggtt
ggtgtaaatattttaatggcacaagtgggatcatttgttccttgtgacagagccaccatt
tctgttcgtgattgcatatttgctcgtgttggtgctggtgattgccaattgcgaggagtg
tccacctttatgcaagaaatgcttgagacagcatcaatattgaagggagccactgacaag
tccctgataattattgatgagctgggccgagggacatctacttatgatggatttggccta
gcttgggcaatttgtgagcacattgttgatgtcatcaaggcacctactttgtttgctacc
catttccatgaactcacagcattagcacatgataacagagagggtgaaccttcaaataaa
aagattattggtgtagcaaattaccatgttagtgcacacatagattcttcaagtcgtaag
ctgaccatgctctacaaggttgaaccaggggcttgtgatcaaagttttggcattcatgtt
gctgaatttgccaattttcctgaatcggttgtatccctagcaagagaaaaggctgctgag
ctggaagatttctcccctgccacaataaatgctgttgatctttctaaaaaggtgggacat
aaacggaaaagggaatttgattccgatgctgtctctcagggtgcagcaagggctcaccag
ttcttgaaagagtttgctgagcttccattagaacagatggatttgaagcaagcattggat
catgtgaacaaaatgaagagtgacttagagaaggattcagagaactgtcactggttgaag
cagtttctgtag
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