Chenopodium quinoa (quinoa): 110699693
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Entry
110699693 CDS
T05764
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110699693
Membrane trafficking [BR:
cqi04131
]
Protein recycling
Others
EARP complex
110699693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Osteoregulin
Motif
Other DBs
NCBI-GeneID:
110699693
NCBI-ProteinID:
XP_021732908
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MQPGIGTSSSSSSPFSLSPLPFIYSINGELSNTSVEGFDSSRVFFLASFWLFRGVGGGGS
GGGSMDFSKVGEKILSSVRSARSLGFLPAASDRPEVPARAEAAAAVARALATLPPDQRLS
LPSSSAELSSMYGSRSHDPVVEELEEEFYEEDFDPVMFVLEHIPSEDDELEHYEAKATVR
LAQLEKISAHLSRHVMEHHEEMVRGMQLVRELEKDLKIATVICMNGRRHLTSSMHEVSRD
LIVTESSRKKQVLLDVLPVLTEILHALDMQKELETLVEEGNFCKAFQVLSEYLQLLDTLS
ELSAIQEMSRSVEVWLGSTLQKLDSLLLQVCQDFKEEKYVTVVDAYALIGDVSGLAEKIQ
SFFMQEVLSETHSVLKTTVQEDLDTDSLQYSSRLTYSDLCLQIPESKFRQCLLRTLAVLF
RLMCSYHAIMSFQTENEFPVSRVQDNSIEQFDNSQKPVEVQPMSLGSGTYEDRVDNGSSV
AAAEILERSSTGEYASRSSTDASGTNGSLPENSNLSNLPLDDDAVSNSGSPWYELRRDAT
ALVSQSLQRGCKNFWQLMTSRVSVLLSSAAFCSTSIHQFLKNYEDLNVYVLAGESFCGAE
ASEFRKKLKAACENYFSNFHKQNIYALKMVLEKESWQKLPRDAIQVVSFAGLVGDGAPLI
SSLDFGSMNAGLHHSNKLVPSGEFGSRKSGFSHWIKTGNPFLMKVSSPTNCHTSSPFVDG
TSGSVEPDNSATRSYTTEKATHVEININHSNGRASILDDENEDLLADFIDEDSQLPSRIS
KPHLLRNHSSQWRDDEAAAQTGSSLCLLRFMDKYARLMQKLGIVNVELFKGLCQFFEIYY
YFVFDTFGHQDSYANGKGDAETLNYRLKTAVNRITQDCEQWLKPNLLYSSMSMPVSLNSS
SKNMDLTPTVPPGTNFGQSPGLKETCAAVDTVSLVVCILRRSKAHLQSMLLQNNPTVVED
FFVFLVDSVPDLTEHIYRTTARSLLHINGYVERIANAKWEVKELGMEHNGYVDLLLGEFK
HFRTRLAHAGIHKEVQELLLEYGVEIVADTLVEGLSRVKRCTDEGRALMSLDLQVLINGL
QHFVSKDVKPKMHVVETFIKAYYLPETEYVYWARAHPEYTKSQVVGLVNLVATMKSWKRK
TRLEVIEKIESSA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaggaattggaacttcttcatcatcttcatcgccattttcgttgagtccttta
cctttcatttacagtattaatggcgaattaagcaatacctccgttgaaggtttcgacagt
tctagggtttttttcttggcttctttttggttgtttcgaggcgttggtggtggtggcagt
ggtggtggttcaatggatttttctaaggttggagagaagattctgagctcggttcgctct
gctcggtctcttggttttctaccggcagcatccgatcgtcccgaggttcctgccagggca
gaagcagcagcagctgttgctcgagctcttgcaactctaccccctgatcagaggttaagt
ctcccatcaagttcggccgaactgagttccatgtacggaagcagatctcatgatccagtt
gttgaggaattagaagaagaattttatgaagaggattttgatccagttatgtttgttctg
gagcatattccctcagaagacgatgaattggaacattacgaagccaaggctactgttagg
ctagcccaactggagaaaatatctgcacatttatcccgccatgtcatggagcatcatgaa
gaaatggtaaggggtatgcagttggtcagagaattggagaaggacttgaagattgccacc
gtgatctgcatgaatgggaggaggcacctgacttcttctatgcatgaggtttcaagggat
ctcattgttacagaaagttcaagaaagaagcaagttctcttggatgtgcttccagtatta
acagaaatcctccatgctctggacatgcagaaagagcttgaaacacttgttgaggaaggg
aatttctgtaaggcatttcaagtactttctgaatatttgcagcttctagatactctttca
gagctttcagctatacaagaaatgagtcgcagtgttgaggtttggttggggagcactctt
cagaagctggattctttattgttacaagtttgccaggattttaaagaggagaaatatgta
actgtggttgatgcttatgcattgattggggatgtttctggtcttgctgaaaagatacag
agctttttcatgcaggaagtactttcagaaactcattctgtactaaagactacagttcaa
gaggatctggatacagacagtcttcaatatagttcgagacttacctacagcgacctatgt
ctccagataccagaatctaagttccgacagtgtctgctaagaacactagctgtacttttt
aggctgatgtgttcttatcatgctataatgagtttccagacagagaacgagtttcctgtt
tccagggtgcaagataactcgattgagcaatttgacaattctcagaaaccggtagaggta
caaccaatgagtttaggttcaggaacttatgaggatagagtagataatggatcttcagtt
gccgctgctgagatattggagcgttcttctactggtgaatatgcaagcagaagttctact
gatgcttctggtactaatggctcccttcctgaaaattccaacttgtctaatttgccactg
gatgatgatgctgtgtccaatagtggatctccttggtatgaactgcgaagggatgcgaca
gctcttgtttctcagtctcttcagaggggatgtaaaaatttttggcagcttatgacaagt
cgtgtatcagtattgctttcatcagctgcattttgttcgacaagcattcaccaatttctc
aaaaattatgaggatttaaatgtatatgttttagctggggaatcattctgtggtgctgaa
gcttctgaattcaggaaaaaactgaaggctgcatgtgaaaattactttagtaactttcat
aagcagaatatatatgcactaaagatggttttggaaaaggaaagttggcagaaattgccc
cgtgatgctattcaagtagtcagttttgctggtcttgttggtgatggagcacctttaatt
tcttccttagattttggctcaatgaatgctgggctacatcattctaacaaattagtgcct
tctggtgaatttgggtctcgaaagagtggattttctcactggattaaaactggaaaccct
ttcttaatgaaagtttcatctcctacaaactgtcatacatcatctccatttgttgacgga
acatcaggttctgtagaacctgataattcagctaccagatcttatactactgagaaggct
actcatgttgaaattaacataaatcattccaatggtcgggcttctattctagacgatgaa
aacgaagatcttcttgctgacttcattgatgaagatagtcaactccccagccgaatatct
aaacctcaccttctgcgcaatcactcttcacaatggagagatgatgaggctgcagcacaa
acaggatcttcactttgtctcttgaggttcatggacaaatatgctaggcttatgcagaag
ttaggaattgttaacgttgaattattcaagggattatgccaattttttgagatctattat
tactttgtctttgacacatttggccatcaagacagctatgcaaacggaaaaggtgatgct
gagactcttaattatcgtctgaagacagctgttaacagaataactcaagactgtgaacaa
tggttaaagcctaatctgctttattcttcaatgtcgatgcctgtgtctctaaattcatca
tccaaaaacatggatcttacacctacagttcctccgggcacaaatttcggccaatctccg
ggactcaaggaaacttgtgcagctgttgatacagtatctcttgttgtgtgcatattgcgt
agatcaaaggctcatcttcagtccatgcttttgcaaaataatccaactgtagttgaagat
ttttttgtgtttctggttgattctgttccagacctcacagagcacatctatagaacaact
gcaagatcgcttcttcacattaatgggtatgttgagcgtatcgccaatgctaaatgggaa
gttaaagagcttggaatggagcacaatggttatgttgatttgcttttgggagagttcaaa
cacttcaggacaaggcttgctcatgcgggaattcacaaggaggttcaagaacttctttta
gaatatggtgttgaaattgtagcagacacacttgttgagggactatcacgtgtaaaaagg
tgtactgatgaaggccgagctctaatgtcattggatctacaggtgttaattaatggactt
cagcactttgtgtctaaagatgtaaaaccaaaaatgcacgtagttgagacattcatcaag
gcctactaccttccagaaactgagtatgtttattgggctcgtgcacacccggaatatact
aaaagtcaagttgtagggttggttaaccttgtagcaactatgaaaagttggaagagaaaa
acgagactggaagttattgagaagatagagtcatctgcatga
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