Chenopodium quinoa (quinoa): 110700335
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Entry
110700335 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110700335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110700335
03009 Ribosome biogenesis [BR:
cqi03009
]
110700335
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110700335
Spliceosome [BR:
cqi03041
]
Complex A
U1 snRNP components
U1 related factors
110700335
Complex B
110700335
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
Helicases
110700335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110700335
NCBI-ProteinID:
XP_021733553
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MSYNNHYDNRYTDPSSYRERRSDFIGPPPAHVGGPVGGAQPPYAPPPYVGSGSSGPAPYA
PPYGGSSAPHLPGSGGLNGYPPFEPPASRNFDVGRDSRGPAPRGRGSVGGGSRSSDLGGR
RSDYHHSNGGDRGFDSRRGGGRGGGGGGRSFDGNRGGGRGFSSGGRGGGFSSGGRGGGRG
RGTDLDFLSLPKQDFRNMVPFKKDFYIESPSVRAMSEQEVMVYRAKRDITVEGADVPRPI
RWFPEAGFPGYCLDVIAKLGFTDPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAL
VHVTAQPKLEYGDGPIVLVLAPTRELAVQIQEEALKFGSRANVRSTCIYGGAPKGPQIRD
LKRGVEIVIATPGRLIDMLEAHHTNLKRVTYLVLDEADRMLDMGFEPQIRNIVSQIRPDR
QTLYWSATWPREVETLARQFLRNAYKVVIGSQDLKANHSIRQVIEVMTDLEKYNRLIALL
KEIMDGSKILIFVETKKGCDQVTRQLRMDGWPALAIHGDKDQSERDWVLSEFKSGRSPVM
TATDVAARGLDVKDIKCVINYDFPTSLEDYIHRIGRTGRAGAKGMAYTFFTQSNAKFTRE
LMKILREAGQAVPPALSAMAHSGGSNFGGGNFRSRGRGGFGNRSQISGSNTIPVGRRW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaacaatcactacgataaccgctacaccgacccatcatcttaccgcgaacgc
cgcagtgattttattgggcctccaccggcccatgttggtggcccggtgggcggggctcaa
ccaccctatgcaccaccaccgtatgtgggttctgggtcaagcggcccagctccatatgca
ccaccttatggtggttctagtgcaccccatttgccgggatccgggggtttaaatgggtat
cccccttttgagcctccggctagtcggaacttcgatgttggtcgtgatagtagagggcca
gctcctagaggtagaggtagtgttggtggggggagtaggagtagtgatttagggggtagg
agaagtgattatcatcattctaatggtggtgatagagggtttgattcacgaagaggcggc
ggtagaggaggaggtggaggagggaggagtttcgatgggaatcgaggtggcgggagaggg
tttagtagtgggggtagaggaggagggtttagtagtgggggtagaggagggggaagaggc
cgaggtactgatttggatttcctttcacttcctaaacaagactttagaaatatggttcct
tttaagaaggatttctatattgagagtccatcagtgagagctatgtctgagcaagaggtg
atggtgtatcgagctaagcgtgatattactgtggaaggggccgatgttcctaggcctatt
cggtggtttcctgaagctggattccctggttattgtcttgatgtcatagcgaaattgggt
tttaccgatcctacaccaattcagtctcaaggatggcctatggctttgaaaggtagagac
ttgattggcattgctgagactggatctgggaagactttggcttatttgctgcctgccctt
gttcacgttactgctcagccgaaactggaatatggtgatggtccaattgttctagtatta
gctcccactcgagaattggctgtgcaaatacaagaggaagctctgaaatttggatctcgt
gctaatgttaggagtacttgcatttatggaggggctcccaaaggaccacaaatccgagat
cttaaaagaggtgttgagatcgtgattgctacacctggtcgattgatagatatgttggaa
gctcaccacaccaacttgaaaagagttacatatttggtgttggatgaggctgatcgtatg
ttagatatggggtttgaacctcagatcaggaatattgtctcccagatccggcctgataga
cagactttatattggagtgctacatggccgcgggaggtagaaaccctggcaaggcaattc
ctacgtaatgcttacaaggttgtcattggatctcaagatctgaaggctaatcattctatc
cgacaagttattgaagtcatgactgatttagagaagtacaacaggttaattgcactgctc
aaggaaataatggatgggagcaaaatccttatatttgtggaaacaaaaaaaggatgtgac
caggtcactagacagttgagaatggatgggtggcctgctttggccatccatggtgataaa
gaccagtctgaaagggattgggtcctgtcagagtttaaaagtggcagaagtcctgtgatg
actgctactgatgttgctgcacgtggtcttgatgtgaaggacataaaatgtgtgataaat
tatgattttccgacaagtcttgaagattacattcacaggatagggagaactggtcgtgct
ggggccaagggaatggcctacacatttttcactcagtcaaatgccaagtttaccagggaa
ctcatgaagatcttgagagaagcagggcaggctgtccctccagctttgtctgcaatggcc
cactcaggtggctccaactttgggggtggcaattttcgctcaaggggtcgtggaggtttc
ggtaacaggtcacagatttctggatcaaatactattcctgttggcagaagatggtag
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