Chenopodium quinoa (quinoa): 110700686
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Entry
110700686 CDS
T05764
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110700686
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110700686
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
110700686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_19
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
110700686
NCBI-ProteinID:
XP_021733961
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MVLQLPRLTNSLRDPFDIDRAYLHRKTLLQNLFPTSNANSVDESELARKIVFDWEQASTE
VRQAYKQFIGAVVELIGGEVVSDEFREVALTVYRLFGVRGEEEEEDSRMLAEKKSELQKL
LGYTVSEGSLRKVVQLAQRLCSLQPRTASPNMDGNLIDDDVEFGSNLDFRPPSRFLLDIT
LDDEEILGPEDLAPSTSVYNDWPATDADNNRFSNGGIKYDLKWLRDSCDLIVRGSGSQLS
RDELAMTICRVLDSDKHGEEIAGDLLDLVGDSAFETVQELILHRKQLVEAISHGLLVLRS
DKSPSNAQPRMPSYGTQVTVHTESEKQIDKLRRKEEKRHKRGVGQGIEDDFSSTSFSSLL
EASERKNLFDDVIGKGPGPQSLGVSALPQGTVRKHFKGYEEVIIPPIPTAPMKPGERLIE
IKELDEFAQAAFHGYKSLNRIQSRIFQTVYYTNENILVCAPTGAGKTNIAMISILHEIGQ
HFKDGYLHKNEFKIVYVAPMKALAAEVTATFSHRLAPLNMTVKELTGDMQLSKNELEATQ
MIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQS
MIRIVGLSATLPNYLEVAQFLRVNPDSGLFFFDSTYRPVPLAQQYIGISEKNYMARTELL
NKICYFKVVESLKQGHQAMVFVHSRKDTGKTAERLVELAREDNNLELFQNETHPQFHLIK
KEVMKSRNRELVGLFDSGLGIHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPA
HTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLL
TNQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWDEI
VVDPSLGLKQRSFITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVETYNE
MLKRHMSDSEVIDMVAHSSEFENIVVRDEEQMELENLARECPLEIKGGPSSKHGKISILI
QLYISRGSIEAFSLISDAAYISASLARIMRALFEICLRRGWSEMSAFMLEYCKAVDRQIW
PHQHPLRQFDRDISLEILRKLEDRGADLDRLYDMEEKDIGALIRFVPGGKTVKQYLSFFP
MVLLSATVSPITRTVLKVDLLVTPDFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTLS
KRTARADPQKLSFTVPIFEPHPPQYYIRAVSDSWLQSESFYTISLHNLALPESHTSHTEL
LDLKPLPITALGNSMYESLYSFSHFNPIQTQAFHVLYHTDNNVLLGAPTGSGKTISAELA
MFHLFNSQPDMKVIYIAPLKALVRERMKDWKRRLVTQLGKKMVEMTGDFTPDLMALLSAD
IIISTPEKWDGISRNWHTRSYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTER
SVRFVGLSTALANAGNLADWLGVGEVGLYNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMN
KPAYAAICSHSPTKPVLIFVSSRRQTRLTALDLIQYAASDEHPRKFLNIPEDALQMILSQ
ISDQNLRHTLQFGIGLHHAGLNDKDRSVVEELFGNNKIQVLVSTSTLAWGVNLPAHLVII
KGTEFYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFP
VESSLREHLHNHFNAEIVSGTISHKEDAIHYLTWTYLYRRLTVNPAYYGLEDINPVVVSS
YLSRLVQSTFEDLEDSGCIKMVEDSVEPMILGSIASQYYLSYLTVSMFGSNLGPGLSLEV
SLHILSAASEYDELPVRHNEENHNATLAERLPYKVDKNRLDDPHVKANLLFQAHFSQLEL
PVSDYVTDLKSVLDQSIRIIQAMIDVCANSGWLSSTLNCMHLMQMVMQGLWFDNGSALQM
LPCLNNNVMVTLTRQGISNVQQLLDVPRATMQGLLGSFPASSLYEDLQRFPRIHVKLRLK
KKNERASSSSLNVRLENVNAKRKTPRAFTPRFPKVKDEAWWLVLGNTVSSELYALKRVSF
ADHLVTNIDFPSDLVICQGLKLILVSDCYLGYELEYSLEELLRDQP
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttcaactccctcgactcaccaactctcttcgagaccctttcgacatcgatcgt
gcttatcttcatcgcaaaactctcctccaaaacctctttccaactagtaatgccaattca
gttgatgagtcggaattagcgcgaaagattgtttttgattgggaacaagcttctactgaa
gtgcggcaagcgtacaaacagtttattggcgcggttgttgaactgattggtggagaagtt
gtgtcggacgagtttcgtgaagtggcattgactgtgtatcgactctttggtgtccgaggg
gaggaggaggaggaggatagtagaatgctcgccgagaaaaagtctgaattacaaaaatta
ctgggttatactgtttctgaaggtagcctgcggaaagtagttcaattggctcagagacta
tgtagtctgcaacctagaacagcttcacctaatatggatggaaatttgattgatgatgat
gtagagttcggatctaatcttgattttagacctccttcacggtttttgcttgatattact
ttggatgatgaagaaattttggggccagaggacttggctccatcgacttcagtgtacaac
gattggcctgcaactgatgctgataacaaccgtttttcaaatggtgggataaaatatgat
ttaaaatggttaagagactcatgtgatctaatagttcgaggaagtggctcacagctttct
cgagatgaactggccatgacaatttgtcgagttctcgattctgacaaacatggggaagag
attgctggtgatctactggatcttgttggggatagtgcttttgagactgttcaggagctt
atcttgcatagaaaacagcttgttgaagcaattagtcatggcctgctagtattacgatct
gataagtcgccttcaaatgctcaaccgcgcatgcctagttatggcactcaggtcactgtg
cacactgagtctgagaaacagattgataaacttaggcgcaaagaggagaaacgccacaag
cgtggagttgggcaagggatcgaagatgacttttcctctacaagtttttcatccttgctg
gaagcaagtgagaggaaaaatctatttgatgatgtgattggaaagggaccaggacctcag
tcattaggtgtttctgcacttccacagggaactgtgagaaagcatttcaaaggttatgaa
gaagtcataattcctccaataccaacagctccaatgaagcctggggaaagactgatagag
ataaaagaattagatgaatttgcccaagctgcttttcatggatacaaatccctcaatcgt
atccagagcaggatctttcagacagtctactacactaatgagaatattctagtatgtgcc
ccaacaggagctggcaaaacaaatatagctatgatttctattctacatgagattggacag
catttcaaggacggttacctgcacaaaaatgagttcaagattgtttatgttgctccaatg
aaggcattagctgctgaagttacagctacatttagccatcggttagctccattaaatatg
acagtaaaggagcttacaggagacatgcaactttctaagaatgaacttgaagcaactcag
atgatagtgaccacacctgaaaaatgggacgtcatcacgcgcaagagcagcgacatgtca
ctttcaatgcttgttaagcttttaataattgatgaagtacaccttttgaatgatgataga
ggtcctgttatagaagcattagttgctcgtactcttcgtcaggtcgagtcaactcaatcg
atgattcgcattgtgggtctctcagccactctaccgaattatttggaggtggcacaattt
ttgagggtgaatccggactcggggctctttttctttgattctacctaccgtcctgtgcct
cttgcacagcagtacattggtatcagtgagaaaaactatatggctcgcactgagctgttg
aacaagatttgctacttcaaggttgttgaatccctaaagcaaggtcatcaagcaatggtc
tttgtccattcacgcaaagatactgggaagactgctgaaagactggttgagcttgcccga
gaggacaataatctagagctttttcagaatgagacacatccacagtttcacttgataaag
aaggaggttatgaagtctagaaacagagaattagttggactttttgattctgggttaggt
attcaccatgctggaatgcttcgttctgataggggtcttactgagagacttttttctgat
ggattgctaaaggtgcttgtctgcacagcaactttggcatggggagttaacttacctgct
cacactgttgtgatcaagggcacacaaatatatgatccaaaggctggtggttggcgggac
ttaggcatgcttgatgttatgcagatctttgggcgtgctggaaggcctcagtttgacaaa
agtggtgaaggcattatcattacatctcatgacaagttagcccattacctgcggctactt
actaatcaactccctattgaaagtcagttcatcaactccttgaaagataatttgaatgct
gaggttgcgctgggtactgtcacaaatgtgaaagaagcttgtgcttggcttgggtatacc
tatctatttataaggatgaagatgaatcctttggcatatggtattggatgggatgagata
gttgtggatccttctttgggtttaaaacaaaggtcatttataactgatgctgctcgtgcc
cttgataaagcaaagatgatgcgttttgatgagaaaagtggcaatttttactgtactgag
cttggtcgtattgcaagtcatttctatatacattattccagtgtggaaacttacaatgaa
atgttgaagcgacatatgagtgatagtgaggttattgacatggttgcacattcttctgag
ttcgaaaatattgttgtaagagatgaagaacaaatggaattagaaaatttagcacgtgaa
tgccccttagaaattaaaggtggtccctccagtaaacatgggaaaatttctatcctcatt
cagttatacatatcgcgtggatccatagaggctttctcattgatttctgatgctgcatat
ataagtgcaagtttggctcgtattatgcgtgctttatttgagatatgcttgcggagagga
tggtctgagatgtcagcgttcatgttagaatactgtaaggctgtagatcgtcaaatctgg
cctcatcagcatccactcagacaatttgatagggatatctccttagagatcttgaggaag
ctcgaagatcgaggggctgatctggatcgcctttatgatatggaagaaaaggatattgga
gctctgattcgttttgtacctggagggaagacagtgaagcaatatttgtcattttttcca
atggtcctgttatcagccactgtcagtcctatcacgagaactgtcttaaaggttgattta
cttgtaactcctgatttcatttggaaggatcgttttcatggaactgctcagcggtggtgg
attcttgttgaggattcggaaaatgaccatatatatcattcagagctgttcacactttcg
aagagaacagcaagagcggatcctcaaaagctttcttttaccgtgccaatatttgaaccg
catccaccacaatattatatacgtgctgtttctgactcttggcttcaatcagaatctttt
tacactatatctcttcacaatcttgctttgcctgagtctcacacttcccatacagaactg
cttgatttaaaacctcttccaataaccgcgcttggtaatagtatgtatgaatccttgtac
agcttctcgcacttcaatccaattcagacacaggcttttcatgtcctgtatcacacagac
aacaatgttctcttaggagctcctacaggaagtggaaaaactatatcagctgagcttgca
atgtttcacctattcaattctcagcctgatatgaaggttatatatatagcacccttgaag
gccctagtccgagaaagaatgaaagactggaaaaggcgacttgtcactcagctggggaaa
aagatggttgaaatgactggtgattttactccagacttaatggcccttttgtcagcagat
atcatcatttctactcctgaaaagtgggatggaatcagccgtaactggcacactcgaagc
tatgttaaaaaggtagggcttatgattttggatgagattcacctacttggagctgatcgt
ggaccaattcttgaggtcattgtctcaaggatgagatatatatcgtcacagacagaacgt
tctgtgcgatttgtgggtttatcaacagctttagcaaatgcagggaatttggctgactgg
ctgggtgtcggtgaagtgggactctataatttcaagccgagtgtgcgacctgtaccactt
gaagtccatatccagggataccctgggaaattctattgtccaagaatgaatagcatgaat
aagcctgcgtatgctgctatctgttcacattcacctacaaagccagttcttatttttgtt
tcctcgcgtcgacaaacaagacttactgctttggaccttattcagtatgctgcatctgat
gagcatccaaggaagttcttgaatataccagaagatgcactgcagatgattctttcccag
atatcagatcaaaacctaaggcacaccttgcagtttggaattggtttgcaccatgctgga
ttgaacgacaaggatcgatctgtagttgaagaattgtttggaaacaacaagatccaggta
ttggtttcaactagtacattggcttggggtgtgaatcttcctgcacatcttgttattata
aagggaacagagttttatgacgggaaatcaaaaagatatgttgattttcctataacagat
atcttgcaaatgatgggtcgtgctggtcgacctcaatatgaccagcatgggaaagcagtt
attttggttcatgaaccaaaaaagagtttctacaaaaagttcctttatgaaccctttcca
gttgagagtagtctcagagagcacttgcacaatcacttcaatgcagaaattgtgtctggc
acaatttcccataaggaggatgccatccactacttaacctggacttatctttaccgaagg
ctgacggttaatccagcttattatggtttggaagatatcaatccagtggtcgtgagctct
tacttatcaaggttggtgcaaagtacatttgaggatctagaagacagtggttgtataaaa
atggttgaggatagtgtggaaccgatgattctaggctcgattgcatctcaatattacctt
agttatttgaccgtgtcaatgtttggctccaaccttggaccaggcctttcgcttgaagtt
tcattgcatatattatctgctgcttcagagtatgatgagcttcctgtgcggcataatgag
gaaaaccacaatgcaacattagctgagaggcttccatacaaggtggataagaatcgtctt
gatgatccacatgttaaagcaaatttgctctttcaggcacacttttcccagttagagctg
ccagtcagcgactatgtgacagatctaaagtctgttttggatcagagtatacgtataatt
caggccatgatagatgtatgtgccaacagtggatggctttctagcacacttaattgtatg
catctaatgcagatggtcatgcaggggttgtggtttgacaatggttctgctttacaaatg
ttaccctgcttgaacaacaatgttatggttacactcacaagacaaggtatatcaaatgtg
cagcaactattggatgttcctagggcgactatgcaaggtctacttggaagtttcccagct
tcaagtttatacgaggatttgcaaaggtttcctcgcatacatgtgaaattgagacttaag
aaaaagaatgaaagggcgagttctagttctcttaatgtgaggttggagaatgttaatgcc
aagcgaaagacaccaagagcatttactcctcgattcccaaaggttaaagatgaagcgtgg
tggcttgtactcggaaatactgtctcttctgagttatatgcattgaagagagtttcattt
gctgaccacctggttacgaacatagattttccgtcagatttggtcatatgccaggggttg
aagctcatcttggtctcagattgttatcttggttacgaactggagtactctttggaagaa
cttctcagagatcagccttga
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integrated database retrieval system
