Chenopodium quinoa (quinoa): 110700920
Help
Entry
110700920 CDS
T05764
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110700920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110700920
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110700920
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110700920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
Shikimate_dh_N
Motif
Other DBs
NCBI-GeneID:
110700920
NCBI-ProteinID:
XP_021734178
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MREIELSLNQTQKIRLQRALEKLQSLSSKSAANASVTVADTIPVNNEDNILKGHGTLELD
GEVVATVCGVVDRVDKLVIVRSLRSRYKPDTGDIIVGRVVEVAQKRWRVEIHSNQDAVLM
LSSVTLPDGIQRRRTAVDELNMRNIFVENDVISAEVRNSQHDGTWQLHARSDKYGKLERG
QLITVPSYLVKRRKQHFHQLDQYGVLLILGCNGYVWVGELILAKDSMEVDDANESEKTHA
NSIGEMNLEENYTPLETRQNICRIANAVRVLAVLGFNITVEVILELCDLSTSLNLDIHDM
LGAEFCVAVAEKEVERRSTVNKRKG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaatagaattgtcgttgaatcaaacccaaaagattcgacttcaaagagcccta
gaaaaactccaatctctctcctccaaatctgctgccaatgcttccgtcaccgtcgccgac
actattcctgtcaacaatgaagacaatatcctcaagggacatggaacattggagcttgac
ggcgaagtggttgcaactgtgtgtggtgttgtcgaccgagttgataaacttgttattgtt
cgttctttgcgatccaggtataagcctgatactggagatatcattgttggacgagttgtt
gaggttgctcaaaagcggtggagagttgagatccattcgaaccaagatgctgttcttatg
ctttcttcagtgactttacctgatggtatccagaggcggcgtacagcggttgatgaactc
aacatgcgtaatatttttgtagagaatgatgttatttctgctgaggttcgtaacagtcaa
cacgatggtacttggcagctacatgcaaggagtgataagtatgggaagcttgagaggggt
caactgatcaccgttccttcctatttggtgaaaagacgcaagcagcacttccaccagtta
gatcaatatggtgttctcttaatacttggttgtaatggttatgtctgggttggtgaactc
attttagcaaaagacagtatggaagtggatgatgcgaatgaatctgagaaaacccatgca
aattccattggcgaaatgaatcttgaagaaaattacactcccttggaaacacggcagaac
atatgcaggattgcgaatgctgtccgggtcttagccgttttgggtttcaatataactgtt
gaagttatactggagttgtgtgatttgagtacctcattgaatcttgacattcacgacatg
cttggggcagagttttgtgttgcagttgctgaaaaagaggtggagagacggagtaccgta
aataagaggaagggctga
DBGET
integrated database retrieval system
