Chenopodium quinoa (quinoa): 110700976
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Entry
110700976 CDS
T05764
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110700976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110700976
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110700976
mRNA cycle factors
Common to processing body (P body) and stress granule
110700976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
110700976
NCBI-ProteinID:
XP_021734232
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MVVQMEKTPNSASKERALQLYNKNIELEKKRQKSLQAKIPSDPNAWYQIRENYEAIILED
HAFSEQHNIEFSLWQLHYKRIEEFRGHFSAAQASVRSSATNSGRAPQVQDRITKIRVQFK
AFLSEATGFYHDLILKIRAKYGLPLGHFTEDSDSDTVMGTDTAKSSDVKKALVSCHRSLI
YLGDLARYKGVYGEGESRVREFSAASSYYLQAASLWPSNGNPHHQLAILSTYSSDELVAV
YRYFRSLAAEIPFPTAKDNLVIAFEKNRQNYNQLIETTKTNGDREVSVKEKYKEFCTQFV
RLHGILFTRTSMETFAAVLSSVRGVFHELLSSGAEEELNFGKDGMENGLAILRLVAILIF
TVYNVSKKNEGHSYAEILQHNLLCDNARNVTFELMSLIVERSVQLHDSSSSFLLPSILVF
LEWLACYPEFAACTTNEKKPTAARSSFWKHCIALLNKLLSSRLVAADDDGDETCFTNMTR
YDEGETESRLALSEDFELRGFLPILPAHSILDFSRKRLISVGGSSKEKRTRVKRIIAAGR
ALVSVAMVDHKSVSYDSKVKQFVIGVQLQVSDNSMPSSYMGLTESPSTEQVVTMSSVNSM
TMKENIQQLGEGDDDDEEIVFKPALVEKQMDATGPTWIFNEELKQGRSTPPVSSVHYQQA
TSERIPPSGNVAAQIYPVRDMHDSRWLVEQQASLADGINRLKFMENGHVSNSELKGSLGI
LGAGSHLPPQPSASFMDTAIYSDYRRAPEVMHSSKMDYSAFPEVSTDNMSVKPPSFSSAA
FKSQVGRPVRHLGPPPGFSPVPAKHVSMPMSGVPGSNGSLVVDDYSWLDGYHMPPSVSNI
EPNHASNNVLHANSQFLTTMNSSNGNTGLPFPGMQAPAGQFQGGNPKNYPDYQPFRNLNH
NHEQKLLEQQHVMTGNHQFTPQPEQYQGQSPWTGQYHV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggttgttcagatggaaaagacacctaattcagcatcaaaggaacgtgctctgcagtta
tataacaagaacattgagttggaaaagaagcggcagaagtctctccaggctaagattcca
tctgatcctaatgcttggtatcagataagagagaactatgaggcaataattcttgaagat
catgccttttctgaacagcataatattgaattttccctatggcaacttcattacaagcga
attgaggaattcagaggacacttcagtgctgctcaagcttctgtgcgatcatctgcaact
aacagcgggagagctcctcaagtacaagacagaataacaaaaatccgtgttcagtttaag
gccttcctatctgaggctactggcttctatcatgacttgattcttaaaattagagcgaag
tatggtctccctttagggcattttactgaagattcagacagtgatactgttatgggaact
gacactgctaagtcatctgatgtgaagaaggcactagtttcttgtcatcgtagtctcatt
tatctaggtgatcttgcacgttacaaaggtgtgtatggggagggtgaatctagagttcgt
gagttttctgcagcgtcaagttactatctgcaagctgcgtctctttggccatccaacggc
aatccacatcatcagcttgcaatattgtctacatactcaagtgatgaactggtggctgtt
taccgttattttagaagtttggctgctgagatcccctttccaactgcaaaagacaatttg
gttattgcatttgaaaagaatcgtcaaaactataatcagctgattgagacaacaaagacc
aatggggacagagaagttagtgtcaaggagaaatataaggaattctgtacccagtttgtc
cggcttcatggcattttattcactcgtactagcatggagacatttgctgctgttctttct
tcagtaagaggagtatttcatgagcttctttcttctggagcagaggaagagttgaatttt
ggcaaagatggtatggagaatgggcttgccattttgagacttgtggctatcctcatattc
acagtttataatgtgagtaagaagaatgaaggtcactcttatgctgaaatcttacagcac
aatcttctatgtgataatgctcgtaacgttacttttgaacttatgagtcttatcgtcgag
agatctgtgcaacttcatgattcttcatctagtttccttctacctagcattctggtattt
ctcgagtggttagcgtgttatccagaattcgcagcttgcaccactaatgagaaaaaacca
actgctgctagatcgtcattctggaagcattgcatagctttgcttaataagcttctatcc
agtcgtctggttgcagctgatgatgatggggatgaaacttgttttactaacatgaccagg
tatgatgaaggggagactgaaagtcgacttgctttgtcagaggattttgagttgaggggg
tttttgcccattcttcctgcacatagtattctagatttttcaagaaagcggttaatcagt
gttggtggtagtagtaaggaaaaacgaactcgagtaaagagaatcattgctgcaggcaga
gccttggttagtgtagcaatggttgatcacaagtctgtgtcctatgattcaaaggtgaaa
caatttgtcattggagttcaactgcaagtatctgacaatagcatgccgagttcctatatg
gggttaactgaatcaccttcaactgagcaagtggttacaatgtcatctgttaattctatg
acaatgaaagagaatattcagcaattaggcgaaggagatgacgatgatgaagaaattgtt
tttaagccagcacttgttgagaagcagatggatgccactggaccaacttggatctttaat
gaggaattaaagcagggaaggagtaccccacctgtatccagcgtgcactatcaacaggct
acgtcagaacgtattccgccatctggcaatgttgctgcacaaatttatcccgtgagggat
atgcatgattcacgatggctcgttgaacagcaagcttcacttgcagatggcataaacaga
ttgaagttcatggaaaatggccatgtatcgaattctgaattgaaaggaagtttgggtatc
ctgggtgctggttcacatttgcctccccaaccatctgctagttttatggatactgctatc
tactcagattacagaagagctccagaagttatgcactcatccaagatggattattctgca
tttcctgaagtgtctactgataatatgtctgtaaagccgccatctttctcttcagcagca
tttaaaagtcaagtgggccgtcctgttaggcatcttgggcctccacctggttttagtcct
gttccagcgaaacatgttagtatgcctatgtctggtgtgcctgggagtaatgggtcttta
gtagttgacgattatagctggttggatggttatcacatgccgccctcagtaagtaatata
gagcccaatcatgctagtaataatgttttacatgccaactcccagttcttaactactatg
aatagctcaaatggaaatactggcttgccatttcctggaatgcaagctcctgctggtcag
tttcaaggggggaacccgaaaaactatccagattaccagcctttccgaaatctaaatcac
aaccatgagcaaaagttgcttgaacaacagcatgttatgactgggaatcaccagttcact
cctcagccagagcagtaccaaggacaatccccctggactggtcagtatcatgtgtga
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