Chenopodium quinoa (quinoa): 110701066
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Entry
110701066 CDS
T05764
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110701066
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110701066
microRNA pathway
RISC loading complex
110701066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
DEAD
Helicase_C
Dicer_dimer
ResIII
PAZ
Cas3-like_C_2
SWI2_SNF2
SNF2-rel_dom
dsrm
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
110701066
NCBI-ProteinID:
XP_021734345
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MGAVSMEICGTQDDSSAALSFARSYQLDALEKAMKQNTIVYLETGSGKTLIAVMLLRSYA
YFLRRPTQSNIAVFLVPTVVLVKQQAEVIELHTDLKVGKYWGDMGVDFWDAAIWQKQLDE
YEVLVMTPKILLDALSHTYIKLDKIKVLIFDECHNARGNHPYARIMKDFYHQQMHTNDVP
RIFGMTASPIKAKAKGASDSNGYWKDISALENLMHSKVYTSNSEADLAEYVPIPNAKAQF
YNEDGPNALQTNLINGLNSLREKHISAVRKLGAEASTELSICNKLKKLTNTFRFCLDELG
LWAAIKAGEIVSCNETDIFSWGELDVRGETTIKAFNSDVHNILALHNPSGGCNWSISDIK
ANLDSRIISSKLLCLVESLLRYRSLRDLRCIIFVERVVTAMVFEAILDRLLSQTSGWKAR
YIAGNQSALKSQSRNEQNNLVDEFRRGAVNILVATSILEEGLDVQSCNLVVRFDPSANIC
SFIQSRGRARMQNSDFLLMVKSGDQDELSRMKNYLSSGDVMRKESLSHASLPCQPVEFDE
FDGISYRVPSTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAPRCTIDEALETCTLQFPNSC
PVQSVTVKGNVKVLKKLACLEACKLLHEKGALTDSLVPDIVVEEGLMKDTERELYDEDQA
RYIPPEIVGDGPRCLDTLTYHSYSMELKQDFYSDIPVHDIIVVFKSKLASDVGNMQFDME
VDWGKMSVDIKYAGMINLSDEQVTLCRQYQAALLRVLRDRSFDKLVESLKGFYKWEKNVN
VPVSHYDYILLPRQWVHRSSLVDLECISSASFLRDVVQGSFSNYNKRKCAHQDDVYTKNG
FLHRSVLENCLVCTPHNGYIYSISGILDGMNGNSYLSLSDGTLKTYKSYYKMRHGIDLKY
ENQALLCGRQVFRLKNYLLRCKQRREKESSGASVELPPELCLIIMSPISVATIYTFSFLP
SIMHQVEALLLSANLRGIILDHCMQNVFIPATKVLEAITTKRCEERFHLESLETLGDSFL
KYAICQQLFKTQQSNHEGLLSIKKDRIISNAALCKLGCQRKIPGFIRYDSFDPKNWIIPG
DPGDCRLKKELICNTYKVYNGGIRKIKSKRVADVVEALLGAFLSSGGQVAALMFMNWLGI
EVELSCITYQRNIPINPRLLVNITHVESILNYSFKDPSLVVEALTHGSYMLPEIPRCYQR
LEFLGDAVLDHLITIHLYSKYPDMSPGLLTDLRSASVNNECYALSAIRAGLHKHILHASQ
ILYKQMAAAVESFRHLSLESTFGWESETNYPKVLADIIESLAGAIFVDSGFNKEAVFKSI
SPLLDPLITPETLKLNPVRELNHICQTHHYAMRRFRTRENGVASITLEVEANGIVHKHTC
TASDKKMAKKIACKAILKSLKESIIDL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagtgagtatggagatttgtgggacccaagatgactcgtctgccgctctttca
tttgcaagaagctaccagcttgatgctttggagaaagccatgaagcagaatactattgtg
tacttggagaccggttcagggaagacattgattgcggtcatgcttcttcgtagttatgca
tatttccttcgccggcctacacagtccaatattgcagtcttcttagtacctactgttgtt
ttggttaaacaacaagccgaagttattgagctgcatacggacttaaaagttggcaagtat
tggggagacatgggtgttgatttttgggatgctgctatttggcagaaacagctggatgaa
tatgaggttcttgtgatgacaccaaagatcttgcttgatgctttgagtcatacttacatc
aaattggacaagataaaagttttaatatttgatgaatgccataatgccaggggaaatcat
ccctatgctcgcatcatgaaggacttctatcatcaacaaatgcatactaatgacgtcccc
agaatttttggcatgactgcttctccaatcaaagcgaaagctaaaggcgcgtctgactca
aatggttactggaaagatattagtgccctggaaaacctcatgcattctaaggtctatacc
agtaatagcgaggcagacttggctgagtatgttcctatcccaaatgctaaggctcagttt
tataatgaggatggtccaaatgcattgcaaacaaatctgatcaatggcttgaactcgctg
agagaaaagcacatatctgctgttagaaagttgggtgctgaagcatcgacagaattatct
atatgtaacaaattaaagaagctgaccaatactttccgtttctgtttggatgagcttggt
ctttgggcagcaataaaggccggagaaattgtgtcttgcaatgaaaccgacattttcagc
tggggtgaattggatgttcgcggtgagacgactataaaagcatttaattctgatgtgcat
aatattttagcactccacaacccatctggaggctgcaattggtcaatctctgatataaag
gcaaatttggattccagaattatatcttcaaaattattgtgtctagtggaatctctcctt
cggtataggagtttgagagatttgaggtgtataatttttgtcgaaagggtagttactgca
atggtttttgaggctatattggatcgactactttctcaaacaagtggctggaaggcaaga
tacattgctggaaatcagtctgcactaaagtcccaaagcaggaatgagcagaacaatctt
gttgatgaatttcgccgaggggctgtgaacattcttgttgctacctccatcctagaagaa
ggtttagatgtccaaagttgcaacttggttgtccgttttgatccgtcagccaacatttgc
agtttcattcagtctagaggtcgcgctaggatgcaaaattctgatttcttgctgatggtg
aaaagtggtgatcaagatgagctatcgcgcatgaaaaactatctttcctctggtgatgtg
atgcgcaaggagagtttgagccatgcttcgcttccttgtcaacctgtagaattcgatgaa
tttgatgggatctcctatcgtgtaccgagcacaggagcagttgttacactgagttctagt
gtgagcttgatatacttttactgctcacgtctcccttccgatggatactttaaacctgct
cctcgctgcaccattgatgaggctttggagacctgtacactacaatttccaaatagttgt
ccagtacagtcagttactgtgaaaggcaatgtcaaagttttgaagaaacttgcttgcctg
gaagcatgcaagttgctgcatgagaagggtgctttgacagattcacttgttcctgatatt
gttgtagaagagggtctaatgaaagatactgagcgtgaactatatgacgaggaccaagca
agatacattccaccagaaattgtcggtgatggaccacgttgtttagacacattgacatac
cacagctattcaatggaattgaagcaggacttctattctgacattcctgtgcatgacata
attgtggtttttaaatctaagcttgcttccgatgttggaaacatgcaatttgacatggag
gttgactgggggaaaatgtcagtggacataaaatacgcaggaatgatcaatctcagtgat
gaacaggtaactctttgcagacaatatcaggctgctttattgagagttctaagagatcgt
agttttgataagctagtggaatcgttgaaggggttctataaatgggagaaaaatgttaat
gtgcctgtttcacattatgactatattcttctccccagacaatgggttcatcgaagttca
cttgttgatttggaatgtataagctctgcatcctttttacgcgatgttgttcaaggttcc
ttctctaactacaataaacgcaagtgtgcacatcaagatgatgtctacaccaagaatggc
tttttacatcgtagtgttctggaaaattgtttggtgtgcacaccccataatggttacatc
tattctatctctggaattttagatggcatgaatgggaactcttatttgagtttgagtgat
ggtacattaaaaacttacaagagttactacaaaatgagacatgggattgacctgaaatat
gaaaatcaagccttgctttgtgggaggcaggttttccggctgaagaattaccttctaagg
tgcaagcagagaagggagaaggagtcaagtggtgcttctgttgaactgcctcctgaatta
tgtctcatcatcatgtcgcccatatcagttgctacgatttataccttttcatttcttcct
tctattatgcatcaagttgaagctttactactgagtgccaacttgagaggcattatcttg
gatcactgcatgcaaaatgtttttattccagccaccaaggttctagaagcaattacaact
aaacgttgcgaagagagattccatctggaatcccttgagacccttggtgattcgtttttg
aagtatgctatctgccaacagctgtttaaaactcaacaaagtaatcatgagggacttctt
agtataaaaaaagatagaattatatctaatgctgcactgtgcaagctagggtgccaacgc
aagattccgggttttatacgttatgattcctttgatcctaagaattggatcatacccggt
gatcctggagactgtagactaaagaaagagttaatttgtaacacctataaggtctacaat
ggtggaatacggaaaatcaaaagcaagagagttgctgatgttgtagaagcactacttgga
gcatttttgagctctggtggacaagtagctgctttgatgtttatgaactggcttggtata
gaggtggaactttcctgtataacataccagaggaacatccctataaatccccgtttgcta
gtaaacattacacatgtagagtccattttgaattactcattcaaggacccctcactggta
gttgaagcacttacccatggttcatatatgttacctgaaattcctcgatgctatcaacgt
ttggagtttctgggagatgcggtgttggatcatctgatcacaattcacctttactctaaa
tatcctgatatgtctcctggcctgttgactgatctaagatcggcctcagttaataacgaa
tgttatgctctatctgccatccgtgctggacttcacaagcacatacttcatgcttcgcaa
atcctatacaaacagatggctgctgctgttgaaagttttcggcatttatctttagagtca
acattcggatgggagtctgagacaaattatcccaaggttctagcagatataatagaatct
ttagctggggctatctttgtcgattctggattcaacaaagaggctgtattcaagagtata
tcacctcttttggatcccctcatcactccagaaactctgaagctgaatcctgtgagagag
ctaaaccatatatgtcaaacacatcattatgctatgagaaggtttagaactcgtgaaaac
ggcgtggcttccataacactcgaggttgaagcaaatggcattgtacacaagcatacatgt
actgcttctgataagaagatggctaaaaaaattgcctgtaaagctattctcaagtcccta
aaagaaagcattatagacttgtaa
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