Chenopodium quinoa (quinoa): 110701595
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Entry
110701595 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110701595
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110701595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqi03000
]
110701595
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110701595
04121 Ubiquitin system [BR:
cqi04121
]
110701595
Enzymes [BR:
cqi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110701595
Transcription factors [BR:
cqi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110701595
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110701595
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110701595
Ubiquitin system [BR:
cqi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110701595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
Nab2-like_zf-CCCH_
CortBP2
Nup35_RRM_2
FYVE
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110701595
NCBI-ProteinID:
XP_021734918
UniProt:
A0A803L3P4
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MSDEGEKTCPLCAEEMDLTDQQLKPCRCGYEICVWCWHHIMDMAEKDESEGRCPACRIAY
DKDRIVGMAANCERLVQEVNMEKKHKSQKSKVKTSDSRKQLSSVRVIQRNLVYIVGLPLD
LADEDLLQRKDYFAQYGKVLKVSISRTSAGTIQQFANNTCSVYITYSKEEEAIRCIQSVH
GFILDARPLRACFGTTKYCHAWLRNVPCTNPDCLYLHEIGSHEDSFTKDEIISAYTRVQQ
ITGVTNNMQRRAGATLPPPADDYCNNNSVVIEKPTAKSTSTNSASYSKGSPPNSSSGRSV
ALPPAASWGARVSNCNPPSVSLASSNGSSKQKAETVHESPVLATTVSDFISSDSGKKQML
NEEMNANQAKSKLEIPETVKNTGNSSQRNVSEVSSTLSVASAGKSVSQSSCSPAISSDIE
GGEWLLNANSLDRQPFSSCEDNGNCSVMDGKIQKLCSDISSISTDKQLNSEHSEVVGPNG
LTLNNFLSPRNQGIQWHESERLQEHSSATSNKPSTINSLTTQKEVFDLRSDMQPSVLQNI
PSETEDDFNNQRLQDAIVVNQAAIPASSPLHLLSHLRVPLQSHGGADCAGNYTAAPSIVN
RLSDECLTSVSSASVAPNGFLDCFVSHTPDQDSSLLFKGGQESRMGRFDGELGYVDSQPA
LDMGENSIISNILSLDLDSWDDSLTSPQNLAKLLRETDKQEGTVKLAGSWKGQNSNQSRF
SFARQEDSRNHLFDVDPSLGNIGLAAKNPPFGQEFPGIRDPYLDRMGNGFEFPHRNIELS
DNLTSGHSNFSTNKLSFSRSQISAPPGFSAPSRPPPPGFASHERSDQTYGLMNSGNHMVE
TPSFLRNPYQAPPSGNINPVNDIEFIDPAILAVGKGRLPGGLNNSSIDMRQNYPVQPPAF
ENDSRMQLFMQRSHSPHQNLRYTDVRDNFSPPNDAYGFSSRHMDQSQASNHVPFSQFSLQ
QQPRNTAVSNGTWDDWSELQAANDIGVAELLRNDRLGINKFYGGYEDAKFRMTNSGDLYN
RSFGM
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagggtgagaagacctgtccactttgtgccgaggagatggatttgactgat
cagcaattgaagccgtgcagatgtggctatgagatttgtgtgtggtgttggcatcacata
atggatatggccgagaaagatgagtcagagggacgctgccctgcatgtcgcattgcatat
gataaagaccgaattgtagggatggctgcaaactgtgaaaggttggtacaagaagttaat
atggaaaagaagcacaagtcacagaaatcgaaggttaaaacatctgatagcaggaagcag
ttgagtagtgtgcgtgtaattcaaagaaatcttgtctacatagtgggcttacctcttgat
cttgcagatgaagatcttctacaacgtaaagactattttgcccaatatggcaaggttttg
aaggtgtccatatcccggacttcagctggcaccattcagcagtttgcaaacaatacttgt
agtgtatatattacgtactcaaaagaggaggaggcaattcgttgcattcagtcagtgcat
ggatttattttggatgccaggcctttgagggcatgctttggaactacaaaatactgtcat
gcatggctaagaaatgtgccctgcaccaaccctgattgtctatacttgcatgagattggt
tcacatgaggatagcttcacaaaagatgaaattatatctgcttacacaagagttcagcag
attactggggttacaaataatatgcaacggcgtgcaggggctacattgcctcctccagca
gatgattattgcaataacaattctgttgtaatagagaagccgactgccaaaagtacttca
actaattcagcaagctattcaaaaggttcacccccaaatagcagttcgggtagatctgtt
gctctgccgccagcagcgtcatggggtgcacgtgtttccaattgcaatcctccgtctgta
agcttagctagttcaaatggatcatccaagcagaaggctgagacagttcatgagtcacca
gtgctggcaacaactgtttctgacttcatttccagtgatagtggaaagaagcaaatgcta
aatgaagaaatgaatgcaaatcaagctaaaagtaaattggaaattccagaaacagtgaag
aacactggtaatagttctcaaagaaatgtttcagaggtctcttctacactttcagttgct
tcagctggaaagtctgtaagccagtcatcttgctccccagctatcagtagtgatatagaa
ggtggtgaatggcttttaaatgcaaattcgttagacagacaacctttttcttcttgcgaa
gacaacgggaattgttctgttatggacggtaaaattcagaaactctgctctgatatatcg
tctataagcactgacaaacagctaaatagtgaacattctgaggtcgtcggacctaatgga
ttgactttaaataatttcttatcccctagaaatcaaggtatacagtggcatgagtctgag
aggcttcaagaacattcttctgctacctctaataaacctagtactattaattctttgacc
actcaaaaagaagtatttgatttgcgatcagatatgcaaccttcggttttacaaaatata
ccttcagaaacagaagatgattttaataatcaaagactgcaggatgccatagtcgtcaat
caggcagcaatacccgcatcatctccactccatcttttgagtcatttaagggttccttta
cagtctcatggtggtgctgattgtgcaggaaattataccgctgccccttctattgtaaat
agattaagtgatgagtgtttgacaagtgtatctagtgcatctgttgctcctaatggattt
ttagactgttttgtcagccatactccagaccaggatagttctttgctatttaaaggtggg
caagagagtcgtatgggaagatttgatggtgagcttggttatgtggactcacagcctgcc
ctggatatgggggaaaacagcataatttcaaacatactgtccttggaccttgattcttgg
gatgattctttgacatccccacaaaatttggccaagttgttgcgtgaaactgataaacaa
gagggtacggtgaaactagctggttcctggaaaggtcaaaatagcaatcaatccagattt
tcttttgcaaggcaggaagactcacgaaatcatttatttgacgtggatccttcgcttggc
aatattggtctggcagcaaagaatcccccttttggacaagaatttcctggaattagagat
ccttatcttgatagaatgggtaatggttttgaatttcctcatcgaaatattgagctgtcg
gataatttgactagtggccattccaatttttctaccaacaagctttctttctctagatca
cagatttcagctccacccggtttttctgcaccaagtaggcctcctcctccaggttttgct
tcacatgaaagaagtgatcagacttatggcttaatgaattctggaaaccatatggtagag
accccatcattcttgagaaacccttatcaggcaccaccaagtggaaacataaaccctgtg
aatgatattgaatttatagatcctgcaattttagctgttggtaaagggaggctccctggt
gggctcaataattcctctatagacatgaggcagaattaccctgtacagccgcctgcattt
gaaaatgattcaagaatgcagttatttatgcaaagatctcattcaccccatcagaacctt
agatatactgatgttagggataacttctctccaccaaatgacgcatatggcttttcctct
cgacatatggatcagtcccaagctagtaatcatgtccctttttcacaattttcactccag
caacagcctagaaatactgcagtctctaatggtacttgggatgattggagtgagctgcaa
gctgcaaatgatattggtgtagcagagctccttaggaacgatagacttggtattaacaaa
ttctatggtggttatgaagatgccaagtttcgaatgaccaattcaggagatttatacaac
aggagttttgggatgtga
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integrated database retrieval system
