Chenopodium quinoa (quinoa): 110701725
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Entry
110701725 CDS
T05764
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110701725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110701725
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
Pre-60S particles
RNases
110701725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
110701725
NCBI-ProteinID:
XP_021735045
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MDQKLATASKDVLVQIVKLSQKKGMEGDNGGWKDFLKVHDKKFGASMSDPARRTPEVLRA
FLDTFKKEEDLNYFDKLLICHSNRDLVKQVAKSEDAESPVQKLVRLTLEHPQYPIEYTFP
SYKEDWVVTKLGKKSKLATSETLLAVDCEMVLCEDGTEALVKICVVDQDLEVKLHEFVNP
NKAVADFRTQITGVSPEDLDGITCFLADIQKKLKKLLSQGAILVGHSLSNDLKALKVDHA
RIIDTSFVFKLGDGSTKRRPSLNDLCKFVLGFELRKKGAPHNCVDDACAAMKLVLAKIKD
GFDSTIPVVQDDVPDSEKSKLLIHRIPKDLPNEELGQIIPGDFTIEIQASKKVRGDKYSA
LATFKSPQEALCTYENLEGDEEKDTYGRSQKLVSVQLKNGSTAIICVRKMLPDTPLDKVS
AKRAHPTEGPVNESKKLKIERTSEAAQQILCFDHVKEIERLKDLVSQRDQEISSLHKIVA
ALTRKQGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaagcttgctactgcttctaaagatgttcttgttcaaattgttaagttgtca
caaaagaagggaatggagggtgataatggaggatggaaggattttttgaaagttcatgat
aaaaaatttggtgcaagcatgagtgatccagctcggaggaccccggaagtgttacgcgct
ttcttagatacatttaagaaagaggaagacttaaattactttgataaactcttaatatgt
cattctaaccgggacctagtgaaacaagtagcgaaatcagaagatgctgaatcacctgta
cagaagttggttcgtttgacacttgaacatccacagtatccaattgagtatacatttcca
tcatataaggaggattgggttgttacaaaacttggtaagaagtcaaagttggcaacgtca
gagacattgctggctgttgattgtgagatggttctctgtgaggatggaactgaagccttg
gttaaaatatgcgtggtagatcaggatttagaggtaaaactccatgaatttgtcaatcct
aataaagcagtagcagattttaggacacaaattactggtgtttctccagaagatttggat
ggcatcacttgttttcttgctgatatacagaaaaagttgaagaagctattgtcccaaggg
gctattttagttgggcacagtctcagtaatgatctgaaagctttgaaggttgatcatgca
agaatcattgacacctcttttgtcttcaaacttggagatggatcaacgaaaagaagacct
tccttgaacgatttgtgcaagtttgtgttgggttttgaacttcgcaagaagggtgctccg
cataattgtgttgatgatgcatgtgctgctatgaaattagtgctagcaaagataaaggat
ggatttgacagcacaattcctgtagttcaggatgatgtgccagacagtgaaaaatcaaag
ctccttatacacagaataccgaaggatcttccaaatgaagaactaggtcagatcatccct
ggagacttcaccattgaaattcaggctagtaagaaagttcgaggtgacaagtattctgcc
ttagctactttcaaaagtccacaggaggcactttgtacgtatgaaaatctggaaggagac
gaagaaaaggacacttatgggcggtctcagaaacttgtctctgtccagcttaaaaatggc
tcaacagctattatatgtgttcggaaaatgttacctgacactcctcttgacaaagtttct
gcgaaacgagcacatccaacagagggaccagtaaatgaatcaaagaagttaaagatcgag
cgaacttctgaagctgctcagcagattctctgttttgatcatgtgaaggagattgaaagg
ttgaaggatttggttagccaaagggatcaagagatttctagcctgcataagattgtagca
gctcttacaaggaaacaagggctctaa
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