KEGG   Chenopodium quinoa (quinoa): 110702978
Entry
110702978         CDS       T05764                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110702978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110702978
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110702978
Spliceosome [BR:cqi03041]
 Complex B
  Other components
   Prp19 complex
    110702978
 Complex C
   Prp19-CDC5 complex
    110702978
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    110702978
SSDB
Motif
Pfam: BCAS2 TrfA HMMR_N HEPN_Swt1
Other DBs
NCBI-GeneID: 110702978
NCBI-ProteinID: XP_021736428
LinkDB
Position
Unknown
AA seq 254 aa
MATQTANGDVLMLEASPDAARPWASASNAETIDALPYIDDDYGNPAVKQEVDRLVEEEMR
RSSKRPSDFLKDLPPLPKFNFEDHPMLAREYERVRAGKPPMPLDTSRYIPDAPSLNKQND
ETAWKQALQKAQRLLQHQEIRLENLELMSKCGPDVWKHYNQRLEASLTRLQALAAEHGEK
IETVNRERKFQQQNAGNELNVLSAQWRELCLKNIEIQEACVKIESHLEELRKEAAERGWN
LDVNMENGSLGYVK
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcgactcaaactgcaaatggtgacgtattgatgctcgaagcatcaccagatgcagca
cgaccatgggcaagcgcttccaatgcagaaaccatcgatgccttgccttacatcgacgat
gactatggtaaccctgccgtcaaacaagaagtcgaccgcttagttgaggaagagatgcgc
cgaagttccaaaaggccctctgattttcttaaggatcttcctccccttcccaagttcaat
tttgaggatcatccaatgcttgctagagaatatgagcgagtcagggctgggaagcctcca
atgccacttgatacatctcggtatataccagatgctccatcattgaataaacagaatgat
gaaacagcttggaagcaggctcttcaaaaagctcagcgcttgctacagcatcaggagata
aggcttgaaaatttggagctaatgtctaagtgtggtcctgatgtctggaagcactacaac
caacggcttgaggcgtctttaacccgattgcaagcattagctgctgagcacggtgagaag
attgaaactgtgaacagggaaagaaagtttcaacagcaaaatgctggcaatgagctaaat
gttttatctgcacaatggagggagctttgtttgaaaaacattgaaattcaagaagcttgt
gtgaaaattgaaagtcatcttgaagaattaaggaaagaagctgctgagagaggctggaac
ttggatgttaacatggaaaatggttccttgggttatgtgaaataa

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