Chenopodium quinoa (quinoa): 110703613
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Entry
110703613 CDS
T05764
Name
(RefSeq) endoribonuclease Dicer homolog 3-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110703613
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110703613
microRNA pathway
RISC loading complex
110703613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
110703613
NCBI-ProteinID:
XP_021737083
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MDILDGHHIGLDESDTKVKCNESAGAGTTKRKELHGTVHVNALSGTWRDNPHGAVFHAYK
IDFSCDCELYPGFVLLTELKLDEDVANTKVDLYLLDKMVKSSVMPCGEVHLGSDQIRRAM
HFHELLFNGLYGKLFLGSKASGVNREFLLQRDTGLLWSTSYIYLILPIESLDYVDHDSWR
IDWKGIDSCVSVVEFMRNSAWLSAEQSGAQYRSSIGDPSSAGNAGENTIHLANRSLSIEN
LEETVVMSIHTGRIYYVREVLVNTSAESPFDSNVDGAPSKYTSFADYFNKKYGIVLFYPG
QPLLLLKQTHNPFNLLSDSEASALRRKLLSSGDLVDSKRQNHVHMPPELLVCIDIQLSTL
RALYLIPSLIHRLESLMLACQLRKEIACNFHMPSSLILEALTTLRCCEDFSSERLELLGD
SVLKYVVSCHVFLKSPHEHEGKLSGQRQSTICNANLHKLGTKRKLHEYIRDSAFEPRRWV
APGQLSVHPVPCSHGVDTSEVPLDKRFHTIDENTVLGKSCDKGHRWLVSKSIADCVEAVI
GAYYVGGGLMAALHMMKWLGIEAELGPGYVDKAINLASDRSCIQKVDQITALESKLGYDF
STKGLLLEAITHLTEQESGVGYCYERLEFLGDAVLDVLITWHLYQNHTDIDPGELTDLRS
ASVNNENFAQVSVRRNLYQHLQLSSESISKQITEYVTLVMDAEDSKSLQGRQCPKVLGDL
LESIAGAILIDTKLNVEEVWRIFFPLLSPIVTPDNLELPPFRELNELCDRLGYFFKEHCI
NDKDVVLAELRLQLEDILLIGEGIGKTKKAAKGQAALYLLKGLDNKGMSYDKCVLKRKKQ
ELNDVSSGLIDMKFSVMKSKHTSQKKQKVSLLPCGDNEAPDAAIPVIAAVKTDKGGPRNS
LYELCKRLQWPMPSFETNEEKSRSPIEFGEGSDKRTGFNGFTSKISLLIPDYGVMEAMGE
QRADKKSSQDSAALHLLYELEQQGKLVINC
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctagatggtcatcatataggacttgatgaaagtgatacaaaagtgaaatgc
aatgagtctgctggtgctggaaccacaaaaagaaaggagttgcacgggacagttcatgtt
aatgccttatctggtacttggagagataaccctcatggagctgtattccatgcttacaag
attgatttctcttgtgattgtgagttgtaccctggttttgtactcttgacggagttgaag
ctagatgaggatgtagctaatactaaagttgacttgtatctacttgacaagatggtcaaa
tcatcggttatgccatgtggtgaagtgcatttggggtcggaccaaataaggcgagcaatg
cactttcatgaacttctctttaatgggttatatggaaaattgtttctaggatcaaaagca
agtggggtcaatagagagtttcttcttcagagagacactggtcttctgtggagtacttca
tacatttatttgatcttaccaattgagtcgttagactatgtagatcatgattcatggaga
attgactggaagggcattgattcctgtgtctctgtggtagaatttatgaggaattctgct
tggttgagtgctgaacaatctggggcccaatataggagctcgattggtgacccctcttca
gcaggtaacgctggtgagaatactatacatttggctaaccgttcattgtctatagagaac
ttggaagaaactgtcgttatgtccatccacactggaaggatatactatgttcgagaagtc
ttggtcaatacctctgctgagagcccttttgattctaatgttgatggggcaccatcaaag
tatactagttttgctgattacttcaacaagaagtacggaattgtgctgttctatccagga
cagccattgttactgttgaagcagactcataatccatttaatcttctctcagatagtgag
gctagtgcattgcgtcgaaagttgctgtcaagtggtgatctggttgactcaaagcgacag
aatcatgttcacatgccacctgagcttttagtctgtattgatatccaactatcaactcta
agggcgttgtatttaataccttctttgattcacaggctggagtctctgatgttagcctgt
cagctaaggaaagagattgcctgtaactttcatatgccaagctcactgattttggaagca
cttacaactctcagatgctgtgaagatttttcttcagagcgtttagagttgcttggtgat
tcagtgctaaagtatgttgtgagctgccatgtttttcttaaaagtccccatgaacatgaa
ggaaagttatctggccagcgccaaagtactatttgcaatgctaacttacataaattggga
actaagcgcaagctgcacgaatacattcgtgatagtgcatttgagcctcgtcgatgggtt
gctcctgggcagctttcagttcatccggttccttgttcacatggtgttgacacatctgaa
gtgcctttagataagagatttcatactattgacgaaaataccgtacttggaaagagctgt
gacaagggacatcggtggttggtttccaaaagcatagctgattgtgttgaggcagttatt
ggagcatactatgttggtggtggattaatggctgctctccatatgatgaaatggctagga
attgaagctgaactggggcctggttatgttgacaaagctattaatctggcatctgaccga
tcttgcatccaaaaagttgatcagattacagccttggaatccaaactcgggtatgacttt
tctaccaaaggactgctacttgaagctattactcatttaacagagcaagaatctggggtg
ggctactgttatgagaggctggagtttctgggagacgctgtgctggatgtgctgataaca
tggcatctttatcagaaccacacggatattgatccaggagaattaactgacctacgttca
gcttctgtgaacaacgaaaattttgcccaagtctctgtcaggcgaaacctgtatcagcat
cttcagctttcttccgagtcaatctcaaaacagataacagagtacgttacactggttatg
gatgcagaagattctaagtcgctgcaaggaaggcagtgccccaaggttcttggtgacctt
ctggagagtattgccggggcaatactaattgataccaagcttaatgtcgaagaagtgtgg
agaatatttttccctttattgtctcctattgtaacacctgataatcttgagttacctccc
ttccgtgaattgaatgaattgtgtgatcgccttggatactttttcaaagaacattgtatc
aatgacaaagatgtggtgcttgcagaattgagactacaactggaagacattttattgata
ggagaaggaattggtaaaactaaaaaagctgccaagggacaagctgctctttatttgttg
aaaggactggataacaaaggaatgtcatatgataaatgtgttttgaagaggaaaaaacag
gaattgaatgatgtcagttcaggcctgatcgatatgaaattcagtgtcatgaaaagcaaa
catacatctcagaagaagcaaaaggtctctctgctgccttgtggagataatgaagctcca
gatgctgctattccagttattgcagctgttaaaacagataaaggggggccaagaaactca
ttgtatgaattgtgtaaaagattgcagtggcctatgcctagctttgaaactaatgaagaa
aagtcaagatcacctattgaattcggcgaaggctcagataaaaggaccggcttcaatggt
tttacatcgaaaatctctttgctcatacctgactatggtgtcatggaggccatgggggag
caaagagctgataagaaaagttctcaagactcggcagcactgcacttgctttatgagttg
gaacagcagggaaaactagttatcaattgctaa
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