Chenopodium quinoa (quinoa): 110704177
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Entry
110704177 CDS
T05764
Name
(RefSeq) polyadenylate-binding protein 5-like
KO
K13126
polyadenylate-binding protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110704177
09123 Folding, sorting and degradation
03018 RNA degradation
110704177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110704177
03041 Spliceosome [BR:
cqi03041
]
110704177
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110704177
mRNA cycle factors
Stress granule specific factors
110704177
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110704177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
110704177
NCBI-ProteinID:
XP_021737654
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
METAVGTQNQPSSPVVVAGQGTTPVANTEVGGVFGNLSLYVGDLDATVNESQLYELFNHV
APIVSVRVCRDQNKRSSLGYAYVNFASPQDAASAMEILNFTPVNGRPIRIMYSHRDPSLR
KSGFANVFIKNLDSSIDNKALHDTFAAFGAILSCKVAIDSSGQSRGYGFVQFDREEAAQK
AINSLNGMLLNDKQVYVGSFVRRQERNGDGSQKFTNVYVKNLSENYTDEDLMKAFSPFGS
ITSAVVMKDSSGKSRCFGFVNFQSPESAATAVEKLNGTVQDDKTWYVGRAQRKSEREADL
KAKFEQERISRYEKLQAANLYLKNLDDSINEENLKELFSEFGTITSCKIMLNPHGVSKGS
GFISFSTPEEATKALNEMNGKMIGKKPIFVAIAQRKEERKARLQAHFAQAHLHGGMAPLP
TGMHGFYPGSPRLAPQQLYFGQGAPGMLSPHPAGYGFQQQILSGIRPGVPPNFVMPFPVQ
RHGQPGRVGGRRGGNAHQLRQEQQTANRNGGQSFRYMANGRNGLDSPVAPQGLGRPLVPM
TLDVSGVPLTAADVARSGPLSVPTLASALAAASPDSQRMMLGEQLYPLVDRLEHDNAGKV
TGMLLEMDQTEVLHLIESPDALKKKVSEAMDVLHSSTLGSEAGEQLGSLSLTD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcagtaggaacccaaaaccaaccctcatcacctgtggtcgtagccggtcag
ggaacaaccccggtagcaaataccgaggttgggggagtgtttgggaatctgtcattgtat
gtaggtgacttggatgcaactgtgaatgaaagtcagttgtatgaactgtttaatcatgtt
gctcctattgtgtctgtaagggtttgtagggatcagaacaaacgatcatcacttggttat
gcttatgtcaatttcgcttcgcctcaagatgctgcaagtgcaatggagattttgaatttc
acgcctgtaaatggcaggcctattcggattatgtattctcatcgagatcctagcctgcga
aagagtggatttgctaatgtttttatcaagaatttggattcttctattgataacaaagca
ctgcatgacacatttgctgcttttggtgccatactttcctgcaaggtagctattgatagc
agtggtcaatctagaggatatggatttgtacaatttgaccgagaggaagctgcacagaag
gcaatcaatagtttgaatggcatgttgttgaatgacaaacaagtgtatgttggatctttt
gttcggcgtcaggaaagaaacggagatggatcacaaaaatttactaatgtttatgtgaag
aatttatctgaaaattatactgatgaggaccttatgaaagctttcagcccatttggttcc
atcacaagtgctgttgtgatgaaggattcgagtggaaaatccagatgtttcggttttgtc
aacttccaaagtcctgaatctgcagcaactgctgttgaaaagttgaatggaacagttcag
gatgacaagacttggtatgtagggagagctcaaaggaaatcagagagggaagcagacttg
aaagctaaattcgaacaagaaagaatcagtcgctatgaaaagctgcaggctgctaatttg
tatttgaaaaatcttgatgatagcataaatgaagaaaacctgaaggaattgttttctgaa
tttggaactataacatcatgcaagatcatgcttaatcctcatggtgttagcaagggctct
ggttttatttcgttctcaaccccagaggaagcaacaaaagcattaaatgaaatgaatggt
aagatgataggaaagaagcctatatttgttgctattgcccaacgcaaagaagaacggaaa
gcaaggttgcaggctcactttgctcaagctcacctgcacggaggaatggcacccctgccg
actgggatgcatggattctatcctgggtcacctagacttgctcctcaacagctttatttt
ggccaaggtgctccaggtatgctttcccctcaccctgcaggatatggcttccagcagcaa
atcttgtcagggatccgtccaggagttcccccaaactttgtgatgcctttccccgtccag
agacatgggcaacctggacgtgtaggtggaaggagaggcggtaatgctcatcagttgcgg
caagagcaacagactgcaaatcgcaatggtggtcagagtttcagatatatggctaatgga
cgaaatggccttgattcgcctgtggctcctcaaggtctgggaaggccattggtgccaatg
accttggatgtttctggagtgcccttgactgctgctgatgttgcaagatctggcccactg
tcagtgccaacacttgcttctgccctggctgctgcatctcctgacagtcagcgcatgatg
ctaggggaacaactgtatccattggtggatcgtcttgagcatgataatgcaggaaaagtc
actggcatgctgttagagatggaccagacagaagtactgcaccttattgagtctcctgat
gctctcaagaagaaagtttctgaggccatggatgttctccactcatctaccttaggttct
gaagccggtgaacagcttggctcactttcacttactgattga
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