Chenopodium quinoa (quinoa): 110704330
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Entry
110704330 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110704330
03015 mRNA surveillance pathway
110704330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110704330
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110704330
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110704330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5815
Motif
Other DBs
NCBI-GeneID:
110704330
NCBI-ProteinID:
XP_021737810
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADSTETTVKTTSTDEAPETSSATSTPPETSSDTTIPPEIKPAEVKRSWGDEVDDEELAV
DQLSIKENQDLDEPEDSNIKAVTTGDTPYTSAKKFEDLNLSEELLKGLYVEMRFERPSKV
QSVTLPMILTPPHRNLIAQAHNGSGKTTCFVLGMLSRVDPKQQAPQALCICPTRELVIQN
LEVLQKMGKYTGITAERAIPENLDNPTHTPINKRAPVTTQVIIGTPGTIKKWISLRKLSL
SYMKILVFDEADHMLAADGFKDDSLRIMSDIKKSAPKCQVLLFSATFSELVKQFVTRAIP
DYNQLFVKKEELSLESVKQYKVRCPGELEKIQVVREKILELGQKVGQTIIFVRTRNSASY
LHKALVDLGYEVTTIQGALSHEDRDKIVKEFKDGLTKVLISTDVLARGFDQSQVNLVVNY
DLPVKHDVKTEPDCEVYLHRVGRAGRFGRKGAVFNLICDERDNMIMEKIENHFGTKVVEV
PDFRSEADFEAALKEAGLV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccacagaaaccaccgtcaaaactacatccacagatgaagcgccggaaact
tcttccgccacttcaactccgccggaaacctcttccgacaccacaatcccaccggaaatc
aagccggcagaagttaaacgttcttggggcgacgaagtagacgacgaagaattagccgtc
gatcagctttcaatcaaagagaaccaagacttggatgagcctgaagattccaacattaaa
gcggttacgacgggagatacaccgtatacatcagcgaagaagtttgaagatttgaatttg
tctgaggaattactcaagggtttgtacgttgagatgcgattcgaaaggccgagtaaagtt
caatctgttactttgcctatgattttgacaccaccgcacagaaatttgattgctcaagct
cataatggatctggaaaaactacctgctttgttttgggaatgttgagtcgtgttgatcct
aagcaacaagctcctcaagctctctgtatttgccccaccagagaattggttattcagaac
ttagaggtgctgcagaagatggggaagtatactggaattactgcagagagagcaatccct
gaaaatttggataatccaacacatactccaattaataagcgagctccagtaacaacccaa
gtgataattgggactcctggtacaattaaaaagtggatttcattaagaaaattgtcttta
tcttatatgaagatcctggtgtttgatgaagctgatcacatgttagctgcggatggcttc
aaggatgattctcttagaattatgtctgatatcaagaaaagtgctcctaaatgtcaggtg
ttgctgttttctgccacttttagtgaattggtgaagcagtttgttacaagagcaattcca
gattacaatcaattatttgtcaagaaggaagaactatcgctggagtcagtgaagcagtat
aaggttcgttgccccggtgaactggaaaaaattcaggttgttcgtgagaaaatactggag
ttgggtcaaaaggttggccagaccatcatatttgtgcgcacaagaaacagtgctagctat
cttcataaggcacttgtggatttgggttacgaagttacaactattcaaggtgctctttct
catgaagatagagataaaatagtgaaagagttcaaagacgggttaaccaaagttcttata
tccactgatgttcttgctagaggctttgaccagtcacaggtcaacttggtggttaactat
gatcttccagtgaagcatgatgttaagacagagcctgactgtgaggtatatttgcataga
gtaggacgagcaggacgttttgggcgtaaaggcgcagtattcaatttgatttgtgatgaa
agagacaatatgattatggagaagattgagaatcattttggaactaaagtagttgaggtg
cctgattttagaagtgaggctgactttgaagcagctcttaaggaagctgggttagtttga
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integrated database retrieval system
