Chenopodium quinoa (quinoa): 110704745
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Entry
110704745 CDS
T05764
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110704745
03009 Ribosome biogenesis [BR:
cqi03009
]
110704745
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110704745
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110704745
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
Helicases
110704745
Pre-60S particles
110704745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110704745
NCBI-ProteinID:
XP_021738244
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MVGRKRPCADELRAESDDEEVQAEQVEEEERENNGNEVEKIEKKKKKKKSGGIGIMSDQS
FFALPVSEPTKNAIKDIGFSNMTQIQARAIPPLLEGKDVLGAARTGSGKTLAFLIPAVEL
LHQTRFTPRNGVGVVVICPTRELAIQSHAVAKDLLKHHSQTLGLVIGGAGRRGEAERLAK
GVNLLVATPGRLLDHLQNTKGFIFKNLKCLVIDEADRILEANFEEEMRQIIKLLPKERQT
ALFSATQTQKVEDLARLSFQSTPIYIDVDEGRRRVTNEGLQQGYCVIPSDKRLILLYSFL
KRNLNKKVMVFFSSCNSVKFHSELFRYIQIDCLDIHGKQKQTKRTTTFFDFCKAEKGILL
CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLSY
LKSEKVPVKEYDFDTKKLANVQSHLEKLVTNNYYLNKSAKDAYRAYILSYNSHSMKDVFN
VHQLDLQAVATSFCFSCPPKVDIKLDSNASKFRKKSRKIEGRFNESNPYGKRGGDDTRQF
VRY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtaggacgaaaacggccgtgcgccgacgaattgagggctgaaagtgatgatgaagaa
gtacaagcagaacaagtggaagaagaggagagagaaaataatggcaatgaagttgagaag
attgagaagaaaaaaaagaagaaaaagagtggtgggattggaattatgagtgatcaatcc
ttctttgctctaccagtttctgagcctactaaaaatgctattaaggatattgggttctcc
aacatgacccagattcaagctagagctatacctcctctcttggaaggcaaagatgtgctg
ggagctgcgaggactggttctggaaagacccttgcttttcttattccagctgtggaattg
ttgcaccagactcgttttactcctcgtaatggtgttggtgttgttgttatttgtccaaca
agggagcttgctattcagtcacacgctgttgctaaagaccttctgaagcatcattcacaa
acccttggcttggtgattggtggtgcaggccgaaggggagaagcagaacgacttgccaaa
ggtgttaatcttttagtggcaactcccggacgacttcttgaccatcttcaaaatactaag
gggttcatattcaaaaacttgaagtgcttggtaattgatgaagctgacaggattctggaa
gctaattttgaagaagaaatgaggcagatcataaagcttttgccgaaggaacgtcaaaca
gctcttttttcagccactcaaacccagaaggtggaggaccttgcacgcttgtcgttccag
tctactcctatctatattgatgttgatgagggcaggagaagggttaccaacgaaggacta
cagcagggctattgtgttattcccagtgataagagacttatccttctctattcgtttctg
aagaggaatctgaataagaaagtcatggtcttcttttcttcctgcaactcagtaaaattc
cattcagaactctttagatatattcagatagactgtttagatatccatgggaagcaaaag
cagaccaagaggacaacaacattttttgacttctgcaaagcagagaaaggcatacttttg
tgcactgatgttgctgctcgtggacttgatattcctgctgtggattggattgtgcagtat
gatcctccagatgacccaaaggaatatattcatagggttggacgaacagctcgtggggaa
ggtgcaaagggtaacgctttgcttttcctgattccagaagagttgcagttccttagttat
ttgaagagtgagaaggttcctgtgaaagagtatgattttgatacaaagaagctggcaaat
gtgcagtcacatctggagaaattggttacaaataattattacttgaacaagtcagctaaa
gatgcatacagagcctacatattgtcatataactcgcattccatgaaagatgtgttcaat
gtacaccaactcgatctacaggcggtagctacttcgttctgcttttcttgcccaccaaag
gtagatatcaaactagacagcaatgcttcaaagtttaggaagaagagccgtaaaattgaa
gggaggtttaatgaaagcaatccttatgggaagcgaggtggagatgatactaggcaattt
gttaggtattag
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