Chenopodium quinoa (quinoa): 110705344
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Entry
110705344 CDS
T05764
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110705344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110705344
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110705344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
110705344
NCBI-ProteinID:
XP_021738870
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSRKANHGYDYDDDIYEDYDEDYAYDYEDDDDDNVHVEHSDEVVVNKEANKSGVWCCSVC
TYDNEESMTYCEICGVLRFPPSEGSSSSGGIDNKTVGGTCKGSGVSQLAKSLFASVSCRT
PKMAVVSHPQNFCNLTGEGSRCHDIKNVQQHCHVFSDGQSASRRSRLTTIAPFKFDIPSP
DDIISLNTVKKGSAGAPPGFLANNTATMTQSSARQFDSYIEIERTKSEDHSFASTSKSSS
NNGMAEGPSSSIRSEKSPARDPKSKHNSVGGSISPANGAEPENLASAINHMSIDSKPGSS
KLVIPKKNLAQYKPEKWMLPDNVDGVMAQLNLAIVGHVDSGKSTLSGRLLHLLGQISQRQ
MHRFEKESKQQGKGSFAYAWALDESAEERERGITMTVGVAYFDTKKYHVVVLDSPGHKDF
VPNMISGATQADAAILVIDASVGAFETGMDNTGGQSREHAQLIRSFGVDQIIVAVNKMDV
VGYSKERFELIKHQVGSFLRQCGFKESFISWVPVSAMENQNMVVAASDLRLNSWYKGSHL
LDAINSLCPPKRDYEKPLLMPICDIVKTHSMAQISACGKLEAGALRNGCKVLVMPVGEIA
TVRSIECNSQLCAVARAGENVSVVLQGIDAAHVIAGGVLCHPDYPVRVASHLELKILIFD
IKIPILIGSQLEFHIHHAKEAARVVKIVSLLDPKTGKETKKAPRCLVAKQTAIIEVALQD
SICVEDFTSCKALGRVFLRSSGRTIAVGVVTQVIDDQK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaagctaatcatgggtatgattacgacgacgacatttacgaagattatgat
gaagattatgcatatgattatgaagatgatgacgatgataatgttcatgtagagcattct
gatgaagtagtagtgaataaggaagcaaataagtccggggtttggtgctgttctgtatgt
acctatgataatgaagagagtatgacttattgtgagatatgtggtgttcttcgttttcct
ccttctgagggtagcagcagtagcggcggtattgataacaaaacagttggtggcacgtgc
aaaggttctggagtatcccagttggccaagtctctttttgcatcagtgtcgtgtcggaca
cccaaaatggctgtagtctctcacccacagaatttttgtaatctaactggagaaggcagt
agatgccatgacattaaaaatgttcaacaacattgtcatgtgttctctgatgggcagagt
gcttcacgtaggtcccgcctcacaactatagccccgttcaagttcgatatcccttcacca
gatgatatcatctccttgaatacagttaaaaaaggatctgctggtgctcccccaggtttt
cttgcgaacaatacagctacaatgacacagtctagtgcaagacaatttgatagttacatt
gaaattgaaagaactaaatcagaagatcacagttttgcctcaacttcaaaatcttcaagt
aacaatggtatggctgagggtccatctagctctataagatctgaaaagtcccctgctagg
gacccaaaatctaaacacaatagtgtaggtgggagtatttctccagctaatggagcagag
cctgagaatcttgctagtgccataaatcatatgtctatagatagtaagcctggttcatcc
aaacttgttattcctaagaaaaaccttgcacagtacaaacctgagaagtggatgctacct
gacaatgtagatggtgtaatggctcaactaaatcttgctattgttggccatgtggattct
ggaaagtcaacactgtcaggaaggctcttacacctcttgggccaaatatctcaaaggcaa
atgcacagattcgaaaaagaatccaaacaacagggaaaaggttcctttgcctatgcttgg
gctctggatgagagtgccgaagaaagggaacggggtataacaatgacagtaggtgttgct
tattttgacaccaaaaagtatcatgtggttgtgctagactctcctggacataaagatttt
gtcccaaatatgatatctggcgcaacccaagcagatgctgcgattcttgttatagatgcc
tcagttggtgcatttgaaacgggtatggataatactggtgggcaatcacgggagcatgca
cagcttatcagaagttttggtgttgatcaaattattgttgctgttaataaaatggatgta
gtgggttactccaaggaacgatttgaattgatcaagcatcaagttggatcatttcttcgt
cagtgtggtttcaaggaatctttcatctcgtgggttcctgtgagtgctatggaaaatcaa
aatatggtggttgcagcttcagatttacggctaaattcctggtacaagggatctcatctt
ttggatgcaataaattcactttgcccacctaagagagactatgaaaaacccctgctcatg
cccatttgtgatattgtcaagacacattcgatggctcagatatctgcatgtggtaagcta
gaagctggagcccttcgtaatggatgcaaggttttagttatgcctgtaggggaaatagca
acggtacgctccattgagtgcaactcccaactttgtgccgttgcaagagctggagagaat
gtttctgttgttctacagggcattgatgctgctcatgtgatagcagggggagtgttgtgt
catccagattatcctgtgagagttgcatctcatttggagttgaagattcttatctttgat
ataaaaatccctattttgattggttctcagttggagttccatatccaccatgccaaggaa
gcggctagagttgtgaaaatagtatcattgcttgaccccaaaactggcaaggagacgaag
aaagcaccccgctgtcttgtagcaaagcagactgctataatagaggtagctttacaagac
tcaatttgtgttgaggatttcaccagctgtaaagctcttgggcgggttttcctgcgttca
tcaggaagaaccatagcagtaggggtagtgacacaagtgattgatgatcagaaataa
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