KEGG   Chenopodium quinoa (quinoa): 110705344
Entry
110705344         CDS       T05764                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110705344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqi03019]
    110705344
Messenger RNA biogenesis [BR:cqi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110705344
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 Zn_ribbon_RanBP MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 110705344
NCBI-ProteinID: XP_021738870
LinkDB
Position
Unknown
AA seq 758 aa
MSRKANHGYDYDDDIYEDYDEDYAYDYEDDDDDNVHVEHSDEVVVNKEANKSGVWCCSVC
TYDNEESMTYCEICGVLRFPPSEGSSSSGGIDNKTVGGTCKGSGVSQLAKSLFASVSCRT
PKMAVVSHPQNFCNLTGEGSRCHDIKNVQQHCHVFSDGQSASRRSRLTTIAPFKFDIPSP
DDIISLNTVKKGSAGAPPGFLANNTATMTQSSARQFDSYIEIERTKSEDHSFASTSKSSS
NNGMAEGPSSSIRSEKSPARDPKSKHNSVGGSISPANGAEPENLASAINHMSIDSKPGSS
KLVIPKKNLAQYKPEKWMLPDNVDGVMAQLNLAIVGHVDSGKSTLSGRLLHLLGQISQRQ
MHRFEKESKQQGKGSFAYAWALDESAEERERGITMTVGVAYFDTKKYHVVVLDSPGHKDF
VPNMISGATQADAAILVIDASVGAFETGMDNTGGQSREHAQLIRSFGVDQIIVAVNKMDV
VGYSKERFELIKHQVGSFLRQCGFKESFISWVPVSAMENQNMVVAASDLRLNSWYKGSHL
LDAINSLCPPKRDYEKPLLMPICDIVKTHSMAQISACGKLEAGALRNGCKVLVMPVGEIA
TVRSIECNSQLCAVARAGENVSVVLQGIDAAHVIAGGVLCHPDYPVRVASHLELKILIFD
IKIPILIGSQLEFHIHHAKEAARVVKIVSLLDPKTGKETKKAPRCLVAKQTAIIEVALQD
SICVEDFTSCKALGRVFLRSSGRTIAVGVVTQVIDDQK
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgtctcgcaaagctaatcatgggtatgattacgacgacgacatttacgaagattatgat
gaagattatgcatatgattatgaagatgatgacgatgataatgttcatgtagagcattct
gatgaagtagtagtgaataaggaagcaaataagtccggggtttggtgctgttctgtatgt
acctatgataatgaagagagtatgacttattgtgagatatgtggtgttcttcgttttcct
ccttctgagggtagcagcagtagcggcggtattgataacaaaacagttggtggcacgtgc
aaaggttctggagtatcccagttggccaagtctctttttgcatcagtgtcgtgtcggaca
cccaaaatggctgtagtctctcacccacagaatttttgtaatctaactggagaaggcagt
agatgccatgacattaaaaatgttcaacaacattgtcatgtgttctctgatgggcagagt
gcttcacgtaggtcccgcctcacaactatagccccgttcaagttcgatatcccttcacca
gatgatatcatctccttgaatacagttaaaaaaggatctgctggtgctcccccaggtttt
cttgcgaacaatacagctacaatgacacagtctagtgcaagacaatttgatagttacatt
gaaattgaaagaactaaatcagaagatcacagttttgcctcaacttcaaaatcttcaagt
aacaatggtatggctgagggtccatctagctctataagatctgaaaagtcccctgctagg
gacccaaaatctaaacacaatagtgtaggtgggagtatttctccagctaatggagcagag
cctgagaatcttgctagtgccataaatcatatgtctatagatagtaagcctggttcatcc
aaacttgttattcctaagaaaaaccttgcacagtacaaacctgagaagtggatgctacct
gacaatgtagatggtgtaatggctcaactaaatcttgctattgttggccatgtggattct
ggaaagtcaacactgtcaggaaggctcttacacctcttgggccaaatatctcaaaggcaa
atgcacagattcgaaaaagaatccaaacaacagggaaaaggttcctttgcctatgcttgg
gctctggatgagagtgccgaagaaagggaacggggtataacaatgacagtaggtgttgct
tattttgacaccaaaaagtatcatgtggttgtgctagactctcctggacataaagatttt
gtcccaaatatgatatctggcgcaacccaagcagatgctgcgattcttgttatagatgcc
tcagttggtgcatttgaaacgggtatggataatactggtgggcaatcacgggagcatgca
cagcttatcagaagttttggtgttgatcaaattattgttgctgttaataaaatggatgta
gtgggttactccaaggaacgatttgaattgatcaagcatcaagttggatcatttcttcgt
cagtgtggtttcaaggaatctttcatctcgtgggttcctgtgagtgctatggaaaatcaa
aatatggtggttgcagcttcagatttacggctaaattcctggtacaagggatctcatctt
ttggatgcaataaattcactttgcccacctaagagagactatgaaaaacccctgctcatg
cccatttgtgatattgtcaagacacattcgatggctcagatatctgcatgtggtaagcta
gaagctggagcccttcgtaatggatgcaaggttttagttatgcctgtaggggaaatagca
acggtacgctccattgagtgcaactcccaactttgtgccgttgcaagagctggagagaat
gtttctgttgttctacagggcattgatgctgctcatgtgatagcagggggagtgttgtgt
catccagattatcctgtgagagttgcatctcatttggagttgaagattcttatctttgat
ataaaaatccctattttgattggttctcagttggagttccatatccaccatgccaaggaa
gcggctagagttgtgaaaatagtatcattgcttgaccccaaaactggcaaggagacgaag
aaagcaccccgctgtcttgtagcaaagcagactgctataatagaggtagctttacaagac
tcaatttgtgttgaggatttcaccagctgtaaagctcttgggcgggttttcctgcgttca
tcaggaagaaccatagcagtaggggtagtgacacaagtgattgatgatcagaaataa

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