Chenopodium quinoa (quinoa): 110705584
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Entry
110705584 CDS
T05764
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110705584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110705584
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110705584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110705584
NCBI-ProteinID:
XP_021739164
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MEVDREDGRTPTMLRPLACSRTVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
SIEVIWKPKTGQIGKLEREYEMILKRTLQSICILTINPNTTTSIIVQVVNDDGALLPCAI
NAACAALVDAGIPLKHLAVAICCCLAETGCVILDPTKLEEQKMKAFVYLVFPNSVLSVVQ
DSGPTNDEPMEHGIITSVTHGAMSVDDYFNCLKSGRAATAKLSNFLRSRLQNRLPSDLLG
DT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatagggaagatgggcgtacgccaactatgttgagacctttggcttgttct
agaactgtccttaatcgtgctcatggttctgctagttggtcccaaggagataccaaagtg
ttagctgcagtttatggaccaaaggctgggactaagaagaatgaaaatccagagaaggct
tcaattgaagttatttggaagcccaaaacaggacaaattggtaaattggagagggagtat
gagatgattctgaagagaacattacaaagtatctgtatattgactatcaacccaaataca
accacctcaataattgttcaggttgttaatgatgatggtgctcttcttccttgtgcaatt
aatgctgcttgtgctgcacttgttgatgctggaatccctttgaagcatcttgctgttgca
atatgctgttgtttggctgaaacaggatgtgttatattggatcctacaaaactagaagag
cagaaaatgaaggcatttgtgtatttggtgttcccaaattccgtgttatcagttgtacaa
gattcaggccctacaaatgatgaaccgatggagcatggaattatcacatctgttacccat
ggagcaatgtcagttgatgactattttaactgtctcaagagtggacgagctgcaacagca
aagctctctaactttctaagaagccgcttgcaaaatcggcttccaagtgacctgcttggg
gatacatga
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