Chenopodium quinoa (quinoa): 110706138
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Entry
110706138 CDS
T05764
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110706138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110706138
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110706138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-Vps39_C
CNH
Vps39_1
Clathrin
Motif
Other DBs
NCBI-GeneID:
110706138
NCBI-ProteinID:
XP_021739737
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MLGRNNENGPLLPGSRASAPFALPQGRNLPSNCRTVLESLAHFDLSSTSSSSSSLHSFNC
VAIAVIDDSQLVIYCGTNSGDLLLLTINPNCDRSLSATVDDADDGRLKVVRCVNISRSAV
NSIHVVNQISRILVLSDGFLYLVDLQLLQPVKKLGILKGVNIVARRVCSTESGNSNWILE
DGVSSSGSTVGGRLMKKLGGGVRSNRARVKEFSSRGVDNDGACLFVVAMGKKVLFIELNS
GSSKHDREVDGQRGLFVILKEMPCIDGVKTMAWLDDSLILGTDSAYSLMSCITGHVNLIF
SLPDTAAIPCLKLLSKDKKVLLLVDNAGIIVDRHGQPVGGTLVFGCAPCSIAELSSYVVV
ACNGKMEIYHKISGNCVQALSFKGNVGTSNCFVADEEDVNGRFVVFATSSKVFCYRKIPS
EEQIKDLLRKKNYKEAISLVEELEVDGDLSREMVSFVHAQVGFLLLFDLRFEEAIEHFLL
SETMEPSEIFPFVIRDPNRWSLLVPRNRYWGLHPPPVHVEDVVEDGLLAIQRAAFLKKAG
VESAVDNEFLLNPPTRADLLDSAFRNLIRYLLVMRHKDLIQPVKEGVDTVLMYLYRILNC
TEDMENLASSENSCVVEELESLLEESGHLRTLAFLYVNKGMSSNALAIWRVLARNYPLGT
HQDVADSYNVSDSNSIPVSSRETASIEASKILEESADVESILQHLGWISEVNEELAVRAL
TSQKRTSQLPPDDVIAAIDPRKIEILQRYLQWLIEDQDSSDTHFHTLYALSLAKTAFESL
ETNATLNATNKSMREPNTCIPGRNLSSENPVRERLQIFLHSSDLYDAEEVLELIEGSDLW
LEKVTHNVFSFGFMWKNSLAILYRKLGQETLVLQILALKLEDSEAAEQYCVELGRPDAYM
QLLDMYLDPQNGKEPMFNAAVRLLHNHGESLDPLQVLERLSPDMPLQLASETILRMLRAR
LHHYHQGKIVHSLSRAVDVDARLARLEERARNVQLNDESLCDSCHARLGTKLFAMYPDDS
IVCYKCFRRLGESTSVGRRNFKKDALIKPGWLVSR
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgttaggaaggaacaatgaaaacggacctcttcttcctgggtcaagggcttccgcccct
tttgccctgcctcagggacggaacttgccctcaaattgtaggacagtcctagaatctctg
gcacactttgacctctcatcgacttcatcgtcttcctcttctctacattccttcaactgc
gtcgccattgctgttatcgatgattctcagcttgtaatttactgtggtaccaattccggt
gatcttcttttgttgaccataaaccctaattgtgatcgatcattgtcggcgacagtcgat
gatgccgacgatggtaggttgaaggttgtaagatgtgttaatatcagtcgttctgctgtt
aattcaattcatgttgttaatcaaattagtagaattttggttctttctgatgggtttttg
tatctagttgatctgcaattgttacagcctgtgaaaaagttagggattctgaagggtgtt
aatattgttgctagaagggtttgtagtactgaatctggaaattctaattggattcttgag
gatggtgttagtagtagtggtagtactgtaggtgggaggcttatgaaaaagttaggtggc
ggcgttagatcgaatagggcgagggttaaggaattcagttctaggggagtggataatgat
ggtgcctgcctttttgtggtggcaatggggaagaaagtgctgttcattgagctgaattcg
ggcagtagtaagcatgatcgagaggtcgatgggcaacgtgggttgttcgtgattttgaag
gaaatgccgtgtattgatggtgtgaagactatggcttggcttgatgattcattaatttta
gggactgatagtgcttatagtttgatgtcctgcattacagggcatgttaatttgatattt
tctcttcctgatacggctgctattccttgtctcaaattgttgtcaaaagataagaaggtg
cttctactggttgataatgcgggcattatcgtggatcgtcatggacagcctgttggtggt
accctggtatttggttgtgctccttgttcgattgctgagttatcttcgtatgtggtggtt
gcttgtaatggaaagatggaaatatatcataaaatatcaggaaattgtgttcaagctctt
tctttcaagggtaacgttggaacgagtaattgttttgttgctgatgaggaggatgtgaat
ggaagatttgttgtatttgctacatcatctaaggtgttttgttaccgtaaaataccatct
gaagaacaaattaaagatttgttaaggaagaagaattacaaggaagcgatctccttagtg
gaggagcttgaggttgatggtgacctttctagagaaatggtgtcttttgtccatgctcaa
gtggggtttcttttactgtttgacttgcgttttgaggaagcgattgaacatttcttattg
tcagaaaccatggagccatcagaaatatttccatttgttatacgagaccctaatcgatgg
tctttgctggtacccaggaataggtattggggtttgcatccacctcccgtacatgttgag
gatgttgtagaagatggcctgttggctatccaaagagcagcttttttgaagaaagctgga
gtagaaagtgctgtcgacaatgagtttcttttgaatccaccaactagggctgatcttttg
gattcagcatttaggaatttaattaggtatctcctggtaatgcggcataaagatcttatt
cagccagtgaaggaaggagttgacacagttctaatgtacctatacagaatacttaattgc
actgaagatatggagaaccttgcatcttctgaaaatagctgtgttgtagaggaattggaa
tctttactagaagaatctgggcatttgaggacccttgcttttctatatgtgaataaagga
atgagctctaatgcgttagctatttggcgtgttttagctagaaattatccgcttggcact
caccaagatgttgctgattcatacaacgtgagtgattcaaattcaataccagtttccagc
agggaaactgcatccattgaagcgtctaaaatacttgaggagtctgctgacgttgagtcg
attctgcagcatcttggatggatttcagaagttaatgaggaacttgccgttcgcgcttta
acatctcaaaaacgtaccagccaacttccacctgatgatgtaattgccgctattgatcca
agaaaaatagagatccttcaaagatatctgcagtggttgattgaagatcaagactctagt
gatactcattttcatacattatatgctctttcccttgccaaaactgcttttgaaagtctg
gaaacaaatgctactctgaatgctactaacaaaagcatgagggaaccaaatacatgtata
cctggaagaaatttgtcatctgaaaatcctgttagggaaagactacaaatctttcttcat
tcttccgatctgtatgatgcagaagaagttcttgagttaattgaaggctcagacttatgg
ctagagaaggtgacacataatgttttcagttttggatttatgtggaaaaattctctggct
attttatacaggaaattaggacaggaaacattggttcttcaaatattggcactgaagcta
gaagatagtgaggctgctgaacaatattgtgtagaacttggcagaccagatgcctacatg
cagttgcttgatatgtatttagatccacagaacggtaaggagccaatgtttaatgctgca
gtccgtctacttcataatcatggagaatcacttgatcctctgcaagtcctagagagatta
tcaccagatatgccactccagcttgcatcagaaacgatattaagaatgctgagagctcga
cttcatcattatcatcaaggaaaaattgtgcatagtctttcgcgtgcagtcgatgttgat
gctaggcttgctagacttgaggagagagcacggaatgtgcagcttaatgatgagagctta
tgtgattcttgccatgcccgtcttggaaccaagctgtttgctatgtaccctgatgattct
atcgtctgttacaagtgtttccgtcgccttggggaatctacatctgtagggcgccgtaat
ttcaagaaggatgcattaattaaacccggttggctcgtttctaggtag
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integrated database retrieval system
