Chenopodium quinoa (quinoa): 110706910
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Entry
110706910 CDS
T05764
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03020
RNA polymerase
cqi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110706910
09124 Replication and repair
03420 Nucleotide excision repair
110706910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110706910
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110706910
Enzymes [BR:
cqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110706910
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110706910
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110706910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
110706910
NCBI-ProteinID:
XP_021740593
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MNGVEYEYENENENMMMMDDEEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNT
MQEIVDESADIEIRPESQHNPGHQSDFAETIYKIKFGQIYLSKPMMTESDGETATLFPKA
ARLRNLTYSAPLYVDVTKRVIRKGHDGDELTELQELPKVFIGKVPIMLRSSYCTLYQNSE
KDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAES
QNRPPSTMFVRMLSRAGAKGGSSGQYIRCTLPYIKSDIPIIIVFRALGFVADKDILEHIC
YDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLP
HVGVGEYCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFR
KLTRDVRAYVQKCVDSGKDLNLSFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVL
NRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMV
YITVGSAAYPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRDPELLVKTLRQL
RRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQSLLIKKKDIRALQQRESPED
GGWHDLVAKGYIEYIDTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEH
LHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVK
EDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRVAGEDVIIGKTTPLAPEEAQGPSARYS
RRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRVPQIGDKFSSRHGQKGTVGMT
YTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHVGKEGDATPFTDVTVD
NISKALHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQI
LTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIAN
LKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMFTKDVNKIAKDQRKKGA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggttgaatatgaatacgagaatgagaatgagaatatgatgatgatggatgat
gaagaagacgaagaagagatcacccaagaagatgcttgggctgttatcagtgcttatttt
gaagagaaggggttagtgaggcagcagcttgattcgtttgatgagtttattcagaatacg
atgcaggagattgttgatgaatctgccgatatcgagattcggcccgagtcccagcacaat
cctggccatcagtcggattttgctgagacaatatacaagataaagtttggccaaatttat
ttgagtaagcctatgatgacagaatcagacggtgagacagcaaccttgttcccaaaagca
gctagattgagaaacctgacatactcagctcctttgtatgttgatgtcactaaaagagta
attagaaaagggcatgatggtgacgaattaaccgaattacaagagcttccgaaggttttc
attggaaaggtaccgatcatgcttcgttcaagttattgtacattgtatcagaattcagag
aaggatcttacagagcttggtgagtgcccttatgatcaaggtggatacttcattatcaat
gggagtgaaaaggtgcttattgctcaggagaagatgagcacgaatcatgtctatgtgttc
aagaagaggcagccgaacaagtttgcctatgtagctgaagttcgatctatggcagagtcc
caaaacaggcctcccagtaccatgtttgttcgaatgctctctagagctggagctaaaggg
ggttcttcaggccaatacatacgttgtactttaccttacatcaaatcagatattcctatt
attatagtttttcgagccttgggcttcgttgcagataaagatattttggagcatatttgc
tacgacttctctgatactcaaatgatggagttgcttcgcccttctctggaagaggcattt
gtgattcagaatcagcaagttgcccttgattacatcggtaaaagaggagctactgttggt
gttaccaaggaaaagaggattaagtatgccagggaaattcttcaaaaggaaatgcttcca
catgttggtgttggtgaatattgtgagactaagaaagcttactattttggatacattata
catcggcttctattatgtgcactcggtagaagacctgaggatgatagggatcattatgga
aataagagactggatcttgctggtccattgctgggaggtctttttcgaatgttatttcga
aagttaaccagggatgttagagcctatgttcagaagtgtgttgattcaggaaaggatctg
aatcttagctttgctatcaaagctaagacaattactagtgggctcaagtactctcttgcc
actggaaattgggggcaggctaatgctgctggaaccagagctggagtttctcaggtgctg
aatcgccttacatatgcctccaccttgtcacacttacgtaggttaaattctcccattgga
cgtgaagggaagttagctaagcctaggcagctgcataattcacagtggggaatgatgtgt
cctgctgaaacacctgaaggacaagcttgtggattagtgaagaatcttgctctaatggtg
tatataactgttggttctgcagcatatcctatattggaatttttagaggaatggagtacg
gaaaattttgaggaaatttcgccggctgtgatcccccaagctacaaagatttttgtgaat
ggttgttgggtaggaatccatcgagatcctgagttacttgtcaagacattgaggcaacta
aggagaagggttgatgtcaatactgaagttggtgttgttcgagatatccggttgaaagaa
ttgcgtatatacacagattatggtcgttgcagtcgcccgctgtttattgttgagaaacaa
agtcttcttattaagaaaaaggatatccgggcattacaacagagggagtcacctgaagat
ggtggttggcatgacctcgttgcaaagggatatattgagtacattgacacggaagaagaa
gagaccactatgatttccatgactatcaatgatcttgtgacagcacggcttaatccagag
gaggcatactctgagacctacactcactgtgaaattcacccatctttgatattgggtgtc
tgtgcctctattattccatttcctgatcacaatcagtccccacgtaatacgtatcaatca
gctatggggaagcaagccatgggaatctacgtcacgaattatcagttcagaatggataca
ttggcctatgtcctctactatcctcagaagcctcttgttacaacacgtgctatggagcac
ttgcacttcagacagcttcctgctggcattaatgctattgttgccatcgcttgttattct
ggctataaccaagaagattccgtcattatgaaccaatctgcaattgatcgtggattcttc
cgatccctatttttccgatcttacagggatgaggagaagaagatgggaacccttgtcaag
gaggactttgggcgtcccgacagatctaatactatgggtatgcgacatggatcttacgac
aaattagatgatgatgggcttgcacctcctggtactagagttgcaggtgaggatgttatt
attggaaagactactccacttgccccggaagaagctcaggggccatctgcacgttattca
cgacgtgatcatagtattagcttacgtcatagtgagacagggatggtggatcaggtttta
ctaacaaccaatgccgatggcttgagatttgtgaaagtgagggtgagatccgtgcgtgtt
cctcagattggggataagtttagcagtaggcatggtcaaaagggaacagttggcatgact
tacactcaggaggatatgccatggactgtggaaggcatcactcctgacatcatagtgaat
cctcatgctatcccatcacgtatgacaattggccagcttattgagtgtatcatgggtaag
gttgcagctcatgttggaaaggaaggagatgctacaccgttcactgatgtcactgtggac
aatatcagtaaggccctccacaaatgtgggtatcagatgcgtggttttgagaccatgtat
aatggtcacacaggacgaaagctaactgcgatgatattcttgggacctacttactaccaa
agacttaagcatatggttgatgacaagattcattctcgtggccgaggtcctgtacagatt
ctcaccaggcagcctgctgagggacgatctcgtgatggtggtcttcgatttggagagatg
gagcgagactgtatgattgcccatggtgctgcccacttccttaaagaaaggctttttgac
caaagtgatgcatacagggttcatgtatgtgaaaagtgtgggctcattgccattgcaaat
cttaaaaagaattcttttgaatgtagaggctgcaagaataagactgacattgttcaggtt
cacattccatatgcatgcaaactgctcttccaagagctcatgtctatggctatagcgcca
agaatgttcaccaaggatgttaacaagatagccaaggatcagagaaagaagggagcataa
DBGET
integrated database retrieval system
