KEGG   Chenopodium quinoa (quinoa): 110707236
Entry
110707236         CDS       T05764                                 
Name
(RefSeq) protein LST8 homolog
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi04136  Autophagy - other
cqi04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    110707236
   04136 Autophagy - other
    110707236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cqi04131]
    110707236
Membrane trafficking [BR:cqi04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    110707236
   mTORC2 complex
    110707236
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 ASA1 Beta-prop_Nup120_160 WD40_RFWD3 CFAP251_N Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT140_2nd Beta-prop_IP5PC_F Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 SHKBP1_KCTD3_C Beta-prop_DCAF12 Beta-prop_SPT8 PROPPIN Nucleoporin_N Beta-prop_WDR35_TULP_N CFAP43_N
Other DBs
NCBI-GeneID: 110707236
NCBI-ProteinID: XP_021740939
LinkDB
Position
Unknown
AA seq 317 aa
MSQPSVILATASYDHTIRFWEAQTGRCYRNIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSSNPQPVMSYDSHTNNVMAVGFPSNGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMFDGTLVVAA
NNNGTCFVWRLLSGTQTMTNFEPLHRLQAHKGYILKCLLSPEYCEPNRYLATTSSDHTVK
IWNVDNRFTLEKTLSGHERWVWDCVFSVDGAYLITASSDGSAKLWSMSSGEVIQTYQGHH
KAVVCCALNDGAEVSSS
NT seq 954 nt   +upstreamnt  +downstreamnt
atgagtcaaccctcagtgattcttgcaactgctagctatgaccacaccattcgattttgg
gaggctcaaactggtagatgctatcgtaatattcaatacccagattctcaagttaatagg
cttgaaataaccccagataagcgatatttagctgcggctgggaatcctcacattcgattg
ttcgatattaattcgagcaaccctcaaccggtgatgagttatgattctcatacgaataat
gttatggcagttgggtttccatctaatggaaattggatgtattctggttccgaggatggt
acagtgaagatatgggacctcagagctccaggctgtcaaagggaatatgaaagtcgcgct
gctgtgaacactgttgtcctgcacccaaatcagactgaactgatatcaggagaccagaat
ggcaatatccgggtttgggatttgacagcaaattcatgcagctgtgaattggtaccagaa
gttgatacagctgtaaggtctctgacagtgatgtttgatggaaccttggtagtcgctgca
aataataatggaacctgctttgtttggcgtttgttgagtgggacacagacaatgacaaat
tttgagccacttcacaggcttcaagcgcacaaaggatacatccttaagtgccttctttcg
cctgaatactgtgaacccaatagatacttggcaactacatcatctgatcatacggtcaag
atatggaatgttgacaaccgtttcaccttggagaaaactttatctgggcatgaacggtgg
gtgtgggactgtgttttttctgtagatggtgcctacctaataacagcttcctcggatgga
agtgcaaagctttggtcaatgtcaagtggtgaagtcatccaaacatatcaagggcatcac
aaagctgttgtttgctgtgctctaaatgatggagctgaagtgtcttcttcataa

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