Chenopodium quinoa (quinoa): 110707361
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Entry
110707361 CDS
T05764
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110707361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110707361
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110707361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
PRP4
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Vps41
WD_LRWD1
WD40_like
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
110707361
NCBI-ProteinID:
XP_021741076
UniProt:
A0A803MAK3
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MEVDEENPSSASVAEPTPPGTDAEMLATSEPATDIMGPATLTSPMITPAAVPPSAPPAVA
PLSAPPPVLVPSIAPLPIVPPATSRPLAPLPVRPFLTQNGEAMASESESEDDDQGSEMDA
QGSSVGYEITEESRVVRERQEKAMKEFMMKRRAAALAVPTNDVAVRTRLRRLGEPITLFG
EREMERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVDEEMFQYPFYTEGTQEL
LEARKFIAKFSIVRASQRLQRARRKRNDPDEDEDAEVDWALRQAETFVLDSSEIGDDRPL
GGCSFSKDGNLLATCSSSGVAKIWSMPEVKRVSALKGHTVHATDVAFSPVSDIVATASAD
RTAKLWNTDGTLVRTFEGHLDRLARIAFHPSGKYLGTSSFDKTWRLWDIESGAELLLQEG
HSRSVYGIAFHLDGSLVASCGLDSLTRVWDLRTGRSVLALEGHIKPVYGADFSPNGYHLA
TGSEDNTCRIWDLRKKKSLYIIPAHSKLISEVKFEPQEGYYLVTASYDTTVKVWSSRDFK
LIKTLAGHESRVTSLDITGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagatgaagagaatccttcttctgcttcagttgctgaaccaactcctccagga
actgatgctgagatgctggctacttctgaaccagctactgatatcatgggtcctgctact
cttacatcccctatgattacaccggctgctgtccctccatcagctcctcccgcagttgcc
cctttgtcagctccacctccggtgctggtcccatcaatcgctcctcttcctattgttcct
cctgcgacatctagaccattagctcctctccctgtccgccctttccttactcaaaatggt
gaggcaatggcaagtgaatcggaatctgaggatgatgaccagggttcggaaatggatgcg
caaggttcctcagttgggtatgaaattacagaggagagtcgggttgttagggaacgtcaa
gagaaagcgatgaaggaattcatgatgaaaagacgcgctgctgctttagctgtccccaca
aatgacgtggctgtgcggactaggcttcggcgacttggtgaacccattactctctttggg
gagagagagatggaaagaagggaccggctccggatgcttatggctaagcttgatgctgag
gggcaattggaaaagcttatgaaagcccatgaagaagaggaagaagcagcttcagctaag
gatgaggtcgatgaagaaatgtttcagtatccattttatacagaagggacccaagaattg
ttggaggctcggaagtttatagctaagttctctattgtccgagcatctcagcgtctgcag
cgtgcaagaaggaaaagaaatgatccagatgaagatgaagatgctgaagttgattgggct
cttagacaggcagagacttttgttcttgattctagtgagattggtgatgaccgcccactt
ggtggttgttcgttttcaaaagatgggaatttgcttgctacctgttcttctagtggagtt
gctaagatatggagtatgcctgaagtgaagagggtctctgccttgaagggacacactgtg
catgctactgatgtcgcattttctcctgtaagtgacattgtagcaactgcctctgctgat
cgtactgcaaagttgtggaatacagatggtacgttagtgagaacatttgaaggtcattta
gatcgcttagctcgtattgccttccatccatctgggaagtacttgggcacctcaagtttt
gacaaaacttggcgtctatgggatattgaaagtggtgcagagttgcttcttcaagaaggc
catagcaggagtgtttatggcatagcttttcatctagatggatccttggtagcatcatgt
ggactggattctctcacacgtgtctgggatcttcgaacaggaagaagtgttcttgctttg
gaagggcacatcaaacctgtctatggggctgatttttctcctaatggctatcatttggcc
accggttccgaggataatacatgccggatttgggatttgagaaagaaaaagtccttgtac
ataattcccgcccattctaagcttatttcagaggtcaaatttgagccccaagagggatat
tatttggtcactgcttcatacgatacaactgtcaaggtatggtcatctcgagacttcaag
cttatcaagacattggcaggacatgaatcaagagtcacatccttagatattacaggagat
ggacagtgcattgctacggttggacatgatcgaacaatcaagctctggtcaagcagtgtc
ccctctgaagaaaagtcgatggacctaggctaa
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