Chenopodium quinoa (quinoa): 110707809
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Entry
110707809 CDS
T05764
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110707809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110707809
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110707809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
HCV_capsid
Motif
Other DBs
NCBI-GeneID:
110707809
NCBI-ProteinID:
XP_021741550
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MQRQRSILSFFQKPSPENRSSTAGDKVNAAGNRYNLPSQSSFNGGPNKPSSTSSKSSISR
LEEIRGTDTPPEKVPRQVQFDNLTPTDNKKSSVFSSILHKFSKVDPIDRNSQRNQDNGGS
SVVCSMFDMFNECNKVPKESGSCKVPENNSNGSLNKDYSVKSNCDFINLEPETPLGRPFV
PRLKRIQEDCSNFGNKSDFNLTNSSKRVKFAEDSKPVNKSPQEVIEVASKFEWLHPSKIR
DANGRRPSDPIYDKRTLYIPPDVLKKMSASQKQYWSVKCQYMDVLLFFKVGKFYELYELD
ADIGHKELDWKLTNSGVGKCRQVGISENGIDDAVQKLVARGYKVGRIEQLETSDQVKARG
ANAVIPRKLVNVITPSTAAGETIGPDAVHLLAIKEGSCGVDGGTSVYGFAFVDCAALKIW
IGSVSDDASCAALMALLMQVSPKEIIYESRGLSREAQKVLKKYSSTGSMGVQITPMLPVN
GFLEAAEVKAVIQTKKYFKNSGNLWDHLLDGVTNHEFTLRALGGLIDHLSRLMLDDVLCY
GDVLPYQVYRGCLRMDGQTLINLEVFQNNADGGSVGTLFKYLDNCITPSGKRLLRSWICH
PLKDIDEINNRLNVVEALIMRSEIMLIIAQYLRKIPDLERLLGKVKAMVHSQAILTLPLV
GKKTLKQRVKVFGLIVKGLRIGMDLMNVLYNEEHLMSLLSKILDLPPLSEHNALSEFLSQ
FEAAIDSDFPKYQDHDVTEADAEILSILIELFVEKASQWSQVIFALCCIDVLRSFATIAI
DSSGSMCRPSILPQSTSTVCQNNEGPTLKFKGLWHPFALRESGGLPVPNDIVLGKDTNGH
LPRTLLLTGPNMGGKSTLLRAACLAVILAQLGCYVPCETCSLSVADIIFTRLGATDRIMT
GESTFYIECAETASVLQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLF
ATHYHPLTKEFASHPHVSLQHMSCAMKPRSSTGEDFDLVFVYRLATGACPSSYGLQVALM
AGIPKQVVESASTAGEVMKEMIGNSFKSSEQRSEFSTIHEQWLKTILSLACCEDSNFDDD
TYDTLFCLWHELKTSYKNSTAPL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacaaaggtcaatcctctccttcttccagaaaccctcgccggaaaaccgcagc
tccaccgccggcgacaaggtcaacgccgccggaaaccgctacaacctcccttctcagtcg
agcttcaatggcggtcctaacaaacctagcagtacttcttctaaatcatctatttctcga
cttgaagaaatccgaggaactgacactcctcccgagaaagttcctcgtcaagttcagttt
gataatttaactcctactgataataagaaatcttccgttttctctagtattttgcacaaa
ttttctaaggttgatccaattgacagaaattctcagcggaaccaagacaatggtggatct
tcggttgtttgctcaatgtttgatatgtttaatgaatgcaacaaagtgcccaaggaatct
ggctcttgtaaggttcctgaaaataattctaatgggtcgcttaacaaggactattcagtg
aaaagcaactgtgacttcattaatcttgaaccagaaaccccattgggccggccctttgtt
ccacgcctaaagcgaattcaagaggactgcagtaattttggcaataaaagtgatttcaac
ctgacaaactctagcaaaagagtgaaattcgctgaagattcaaaaccagtaaacaagagt
cctcaggaggttatagaagtagctagtaagtttgagtggctccatccttcaaaaattagg
gatgcaaatggaagaaggcccagcgatcctatttatgataaaaggacactatatatacca
cctgacgtcttaaagaaaatgtcagcatcacagaaacagtactggagtgtgaaatgtcaa
tatatggatgtgctgctcttctttaaagtgggaaaattctatgaactatatgagctagat
gctgacatagggcacaaggaactggattggaaactgaccaatagtggtgtggggaaatgt
agacaggttggtatttctgaaaatggcattgatgatgctgtgcagaagttggttgctcga
gggtataaagttggacgaatagagcagctagagacatctgatcaagttaaagcaaggggt
gcaaatgctgttatccctagaaagttagtcaatgtgatcacaccatcaacagcagctggt
gaaaccatcggtcctgatgctgtccatcttctggcaataaaggagggatcttgtggggtg
gatggtggtacttcagtatatgggtttgcttttgttgattgtgctgcattgaagatttgg
attggttctgtcagtgatgatgcatcctgtgctgctcttatggccttgttgatgcaagtt
tcaccaaaggaaattatttatgaaagtagaggattatcaagagaagctcagaaagtgctc
aaaaagtactcatctacaggttccatgggtgtacaaatcacacccatgcttccagttaat
ggtttcttggaagccgcagaagtgaaggctgtgatccagacaaagaaatacttcaaaaat
tctggcaacctctgggatcatctgcttgatggtgtaacaaatcatgaatttaccttgcgt
gctttgggcggtctcattgatcatttatcaaggttgatgttggatgacgttttatgctat
ggagatgtgttgccataccaagtatatagaggttgcctcagaatggatgggcagacactt
attaatcttgaggtttttcagaacaacgctgatggtggttcagttggtacattattcaaa
tatcttgacaactgtataactccttctgggaagcgacttctgaggagctggatttgtcat
ccattaaaagacattgatgaaatcaataatcggctgaatgttgttgaggccttaattatg
cgttctgaaatcatgttaatcatagcacaatatttacgcaagattccagacctggaaagg
ttgcttggtaaggttaaagctatggttcattcacaagctatactgacgttgcccttggta
ggaaagaaaacattgaaacagagggtcaaagtatttggattgattgttaaaggtttgcgg
attgggatggacttaatgaatgtgctatacaatgaagagcatctcatgtcactgctatcg
aaaatactggacctacccccgcttagtgagcacaatgcgcttagtgagtttcttagccag
tttgaagcggctatagatagtgactttcccaagtatcaggatcatgatgtgacagaagct
gatgcggagatactttctattttgattgagctgtttgttgaaaaagctagtcaatggtct
caagtaatatttgctctctgttgcatagatgtcttaagatctttcgccaccattgctatt
gattcaagtggatctatgtgccgaccttctatattaccccagtctacttctactgtttgc
caaaataatgaaggacctacattgaagttcaaaggattgtggcatccatttgccctaaga
gaaagtggtgggttgcctgtgccaaatgacatagttttgggtaaggatacaaatggccat
cttccgcggactttgctgttgactggaccaaacatggggggcaaatccacactcttgcgt
gctgcctgtctagctgttatattggcacagctcggatgctatgttccatgtgagacttgt
tctctatcagttgctgacattattttcacaaggcttggtgcaactgatcggattatgacc
ggtgaaagtacattttacattgagtgtgcggaaacagcatcagttctccaaaatgcaaca
caagattctcttgtccttcttgatgagctaggtcgaggaacaagtacttttgatggatac
gccatagcatatgctgtgtttcgccatctaattgagaaggtgaactgtcgtttgctgttt
gccactcattaccacccgctaacaaaggaattcgcgtcccatcctcatgtttctctgcaa
cacatgtcttgtgctatgaaaccaagatcctccactggagaggactttgatttggtgttt
gtctaccgcctggcaactggagcttgtccttcaagctatggcttacaagtggctcttatg
gctggtatacccaagcaagtagttgaatctgcttcgactgctggtgaggtgatgaaagaa
atgatagggaacagcttcaagtcaagcgagcaaagatcagagttctcaaccattcatgaa
caatggctaaaaaccatactttctctggcatgttgcgaagacagtaattttgatgatgat
acatatgataccctgttttgcttatggcatgagctaaagacctcatataagaactctacg
gctccgttatag
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