Chenopodium quinoa (quinoa): 110708473
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Entry
110708473 CDS
T05764
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110708473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110708473
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110708473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
110708473
NCBI-ProteinID:
XP_021742302
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MATLADSFLADLDDLSDNEADVVVEEDADADNMEEDIDGELADIESLNYDDLDSVSKLLK
SQRYTDIMQKVEDALLKGSEIPEHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPVDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTVEACDRAIELDSARKKVLDFVESRMLYIAPNLSAIVGSAVAAKLMGTAGGL
AALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEVFQSTPPPLRMRACRLLAAK
STLAARVDSTRGDSTGKTGRTLREDIRKKIEKWQEPPPPKIPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRMSAGPSKLAA
KVAKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFS
KIKSNLSRI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacttgccgattctttcttggccgatctggatgatttatcagacaatgaagct
gatgtcgtggtggaagaagatgctgatgctgataacatggaggaggatatagacggagag
ttagctgacatagaatctctgaattatgatgatcttgatagcgtttccaaactactgaaa
tctcaacgttacactgacataatgcagaaagttgaagatgcattgctaaaaggttcagag
attcctgaacatggaatagttttggaagatgatcccgaatatcagctgattgttgactgc
aatgctttgtcagtggatattgagaatgagattattattatccataattttatccgtgac
aagtaccgtctaaagtttcctgagcttgaatctctcgtacatcaccctgttgactatgct
cgtgttgtgaagaagattggcaatgaagtggatttgaccctagttgatctggaagggctg
cttccttctgccatcattatggttgtttcagtcactgcttcaaccaccagtggtaagcca
cttccagaggatgttttacagaagactgttgaggcatgtgatcgtgcaattgagcttgat
tcagcaaggaaaaaagtccttgattttgttgaaagtaggatgttatatattgcacctaat
ctttcagctattgttggaagtgctgttgcagcaaaacttatggggactgctggaggtttg
gctgcattagctaagatgccagcttgtaatgttcagcttcttggggccaaaaggaagaat
ttggcgggattttcgactgcgacatctcagtttcgtgttggctatattgagcagacagag
gtatttcagagtacgccccctcctttgagaatgcgtgcatgtcgtcttttggctgcaaag
tcaacccttgcagctcgagtagattcaacgagaggagattcaactggaaagactggtagg
acattacgagaagatatccgtaaaaagattgagaagtggcaagagcctccaccgcctaag
atcccaaaacctcttcctgtgcctgattcagaacctaaaaagaaaagaggtgggcgaagg
ctaaggaagatgaaggaaagatatgctgtcacagatatgaggaaattggctaacaggatg
cagttcggtgtgcctgaagagagttctctaggtgatggtctgggagaaggatatggtatg
cttggtcaagctggaagtgggaagctacgtatgtctgctggtccaagcaagcttgcagca
aaagttgctaagaaattcaaggaaaagcgctacggaagcagtggtgctacctcagggtta
acttcaagtttggcatttacccctgtgcagggcattgaactttcaaatccacaggctcat
gcacatcaacttggtagtggaactcagagtacatatttttctgaaacaggcacattttca
aaaatcaagagcaacttgagtagaatatga
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