KEGG   Chenopodium quinoa (quinoa): 110708504
Entry
110708504         CDS       T05764                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110708504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110708504
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110708504
SSDB
Motif
Pfam: WD40 DUF3337 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 RAWUL Beta-prop_IP5PC_F Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 110708504
NCBI-ProteinID: XP_021742325
LinkDB
Position
Unknown
AA seq 765 aa
MHRVGSAGNTSGSNRPRKEKRLTYVLNASDDTKHSAGVNCLAVLKSNGSCRSEHLFTGSR
DGTLKRWAIDEEADQVATCSATFESHVDWVNDAVLVGDHTLVSCSSDTALKTWNCMSNGV
CTKTLRQHSDYVTCLAAAGKNSNIVSSGGLGGEVFVWDIEAALAPVSKSNDSTEEEASNG
INGGASNLPITSLRTINSSNSLHSTPNHGYIPTAAKGHKESVYALAMNDSGTILVSGGTE
KVVRVWDPRSGSKTMKLRGHTDNVRALLLDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYA
VHTDSVWALASTASFSHVYSGGRDQSLYLTDLSTRESILLCSEEYPILQLALDDESIWVA
STDSSVHRWPAEGHNPQKMFQRGGSFLAGNLSFSRARASLEGSTPIPVYREPTLKVPGVP
AIVQHEILNNRRHVLTKDTAGSVKLWEITRGTVIEDYGEVSFDEKKKELFEMVSIPAWFT
VDTRLGSLSIHLDTPQCFSAEMYSADLQIAGKPEDDKVNLARETLKGLLAHWLAKRKQRL
GSQSSANGEVQSVKDISARSMTHSRIEVDGSAENDSMIYPPFEFSAVYPPSIITEGSQGG
IWRKKITDLDGTEDEKDLPWWVMDCVLNNRLPPRENTKCSFYLHPYEGSTIQILTQGKLS
APRILRIHKVINYVVEKMVLDKSMEGGVTGDATFAPVGGPLQHSTNVVDGSLRSGLRPWQ
RIKPAIEILCNDQVLSPEMSLATVRAYVWKKSDDLVLNYRVMQGR
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgcatcgagttggtagtgcaggaaatacatctggttcaaatcgtcctcgtaaggagaag
agattgacatatgtcctcaatgcttctgatgacacaaagcattcagctggagtaaattgc
ttggctgtgttgaagtcaaatggctcttgtaggagtgagcacctgtttactggtagtcgt
gatggaacattgaagagatgggctattgatgaagaagcagaccaagtagctacctgctct
gctacttttgaatctcatgtggattgggtaaatgatgctgtccttgttggtgatcatact
cttgtgtcctgttcttctgacactgctcttaagacatggaattgcatgtccaatggtgta
tgcacgaagactttgcgtcagcactcagactatgttacctgtcttgctgcagctggaaaa
aatagcaatattgtttcctctggtggcctcggtggggaggtttttgtttgggatatcgaa
gctgcacttgctccagtttctaagtcaaatgacagtacagaggaagaagcttcgaatgga
ataaatggtggcgcgagtaacctaccaattacaagtttacgtactatcaattccagtaat
tctttgcattctactccaaatcatgggtacattcctactgctgccaaaggccataaggag
tcggtgtacgcattagcgatgaatgatagtgggaccatacttgtttctggtggaactgaa
aaggtggtgcgggtttgggacccaagatctggttcaaagaccatgaagctgaggggacac
actgataatgtcagggctttgctcttggattctacgggcaggtattgcttgtcgggttct
tctgattctatgatcagactatgggatcttggtcaacagcgttgtgtccattcatacgct
gttcatacggattctgtctgggctcttgccagcacagcatcatttagccatgtctacagt
ggtggaagagaccaatctttatatttgacagatttgtccactagagaaagcattttgctt
tgttcagaagaatacccaatattgcaattggcacttgatgatgaaagcatatgggttgca
agtacagattcttcggttcataggtggcctgcagaagggcacaatcctcagaaaatgttc
caacgaggaggatccttcttggctggaaacttgtcattttcaagagcgagggcttccctt
gaaggatctacacctattccagtatatcgggagccaacacttaaggtacctggagttcca
gcaattgtgcaacatgagatattaaacaatcgtaggcatgtgcttaccaaggatacagcc
ggctctgtgaagttatgggagatcacaaggggcactgtgattgaagattatggcgaggta
tcttttgacgagaaaaagaaggagctatttgaaatggtgagcattcctgcatggtttact
gtggataccaggcttggtagtttgtcgattcatttggatacaccacaatgcttttcagca
gagatgtattctgctgatctacaaattgctgggaaacctgaggatgataaggttaacctt
gctcgagaaacacttaagggcctgttagctcattggttggcaaaaagaaaacaaagatta
ggatctcaatcgtcagcaaatggtgaagttcaatcagtgaaagatatctctgccagaagt
atgacccattcacggattgaggttgatggtagtgcagaaaatgattcaatgatatatcct
ccatttgagttttctgctgtttatcctccatccattattactgagggatctcaagggggc
atatggaggaaaaagataactgatttggatggcactgaagatgaaaaggatcttccctgg
tgggttatggattgtgttttgaacaatcgactacctcccagagagaataccaagtgtagc
ttttacttgcatccatatgaaggctctactatccaaattttgacccaagggaagttgagt
gctcctcgaattttaagaatacataaggttatcaattatgtcgttgaaaagatggttctt
gacaagtcaatggagggaggtgtgactggggatgctacatttgctccggttggaggaccc
ttgcagcattcaacaaatgtagtagatgggtctctccgctcggggttgagaccttggcag
cgaataaagcctgcaattgaaatattgtgcaatgaccaggtgttatctcctgaaatgagt
ttggcgactgtacgagcttatgtctggaaaaaatctgatgatctggtacttaattatcgt
gtaatgcagggaaggtga

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