Chenopodium quinoa (quinoa): 110708693
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Entry
110708693 CDS
T05764
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110708693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110708693
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
SR proteins
110708693
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
110708693
NCBI-ProteinID:
XP_021742579
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MTRRIYRTIYVGNLPGDIREREVEDIFYKYGPIVDIDLKIPPRPPGYAFVEFEDERDAED
AVYGRNGYDFDGHRLRVEFAHGGRGSLSSDRHSSYGGSSYRGGAPKHTDYRVMVTGLPSS
VSWQDLKDHMRRAGDVCFSDVFKDRRYGGMTGVVEYASYDDMKRAVRKLDDSEFRNAFSR
AYIRVKEYSRSLSPDDRSRSRSYSRGRSYSRSRSRSCSYSISPRKSSRRSYSRSPSRSPS
RSPSRSRSRSLSRSKSPVRRSVSRSVSRSRSPAARSDRSRSVESEERC
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacgagacgaatttaccgtactatttacgttggtaatcttcccggtgatattcgcgag
agagaagtcgaggatatcttttacaagtatggcccaatcgttgacattgatctgaagatt
ccaccacggcctcctggttatgcttttgttgagttcgaagatgaacgtgatgctgaagat
gctgtgtatggccgtaatggttatgattttgacgggcatcgtttgcgggtggaatttgct
catggtggtcgaggatccctatcatctgaccgtcacagcagttatggaggcagcagttat
aggggtggagcacccaagcacactgactatagagtcatggtcactggactgccgtcatct
gtttcttggcaagaccttaaggatcacatgcgacgagccggagatgtttgtttttcagat
gtattcaaggatcgtcgttatggtggcatgactggagttgttgaatatgcaagttatgat
gatatgaagcgtgctgtcaggaaactggatgattctgagtttcgtaatgcattctctcgt
gcttatattcgagtgaaagagtactccaggagtctgagtccagatgataggtcgagaagt
agaagctacagccgtggccgtagttacagccgaagcagaagccgaagctgcagctacagc
atttctccaagaaaaagttcacgacgttcttattccagatctccttctaggtctccctca
agatccccttctcgttctcgttctagatctttatcaaggtccaaatctccagttcgccgt
tctgttagcagaagtgtcagtcgatcacgttctccagctgcaagatctgatagaagtcgt
tctgttgagtctgaggagcgttgctga
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