Chenopodium quinoa (quinoa): 110709441
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Entry
110709441 CDS
T05764
Name
(RefSeq) cleavage stimulation factor subunit 77-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110709441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110709441
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110709441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_2
TPR_16
GCR1_C
DUF1993
Motif
Other DBs
NCBI-GeneID:
110709441
NCBI-ProteinID:
XP_021743349
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MADNLDNNNDKYNVEAAEILANEALHLPITEAIPIYEQLLAIYPTAAKFWKQYVEAQMAV
DNDDATKQIFSRCLMICPQVPLWRCYIRFIKKVNEKKGFDGQEETRKAFDYMLNCVGADV
ASGPVWLEYISFLKSLPARSAQDETHRMTAVRKAYQKAIITPTHNVEQLWKEYENFENSV
SRVLAKGLISEYQPKFNSARAVYRERKKYVDEIDWNMLAVPPTGSCKEEQQWMTWKKLLA
FEKGNPQRIDSASSNKRIVFAYEQCLMYLYHYPDIWYDYASWHAKSGSVDSAIKVYQRAL
KALPGSEMLKYAYAELEESRGAVQPAKKIYESLLGDGVNATALSHIQFIRFLRRSEGVEA
ARKYFLDARKSPNCTYHVYVAYAMMSFCLDKDPKVAHNIFEAGLKRFMHEPGYILEYADF
LSRLNDDRNIRALFERALNSLPPEESVEVWKRFAQFEQTYGDLASMLKVEQRRKEALSRT
SDDGGVAQEGSLQEVISRYSFMDLWPCSSKDLDNLARQAWLTMNMNRKAEKSNVPNGVTT
TGEEKSTSGVTPMLDQSSKVIYPDVTQMMIYEPGQKQGSTVLPSGMVGGPPTVSTTMSTF
DGILKAAPPALVAFIANLPAVEGPAPDVDFVLSICLQSNPVTGQASKHVPSAGQVPAAAV
SGISEPSGSHKARPAPSGSSVRMARDRQSGKRKDAERQDDDETASMQSSPLPKDAFRLRQ
LHKARGGSASQTGSTSYGSAFSGEQSGSTS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatctcgacaataataatgataaatacaatgttgaagctgctgagattttg
gcaaacgaagcattgcatctgccaattactgaagcaattcctatttatgaacaacttctg
gccatatatcctactgctgcaaagttttggaagcagtatgtggaggcacaaatggctgtc
gataatgatgatgctacaaaacaaatctttagccgttgtctaatgatttgtcctcaagtt
cctctttggaggtgctatattcgttttataaagaaggttaatgaaaagaagggctttgat
ggtcaggaagaaacaaggaaagcctttgattatatgctgaattgtgtcggagctgatgtt
gcatcgggccctgtatggttagagtacatcagcttcttgaagtccttaccggctcgttca
gcacaggatgagactcatcgtatgactgctgttcgcaaagcatatcaaaaagctattatc
actccaacgcacaatgttgaacaactatggaaggaatatgagaattttgaaaattctgtt
agccgcgtactggctaaaggacttatatcggagtatcaaccaaaatttaatagtgcaaga
gctgtctatagagagcggaagaaatatgttgatgaaattgattggaacatgctggccgtc
ccaccaactggttcttgcaaggaagaacaacaatggatgacatggaaaaaacttttagca
tttgaaaaggggaatcctcaaaggattgacagtgcatcatctaataaaagaattgtcttt
gcttatgaacagtgtctgatgtatttatatcattatcctgatatatggtatgactatgct
tcatggcatgcaaaaagtggttctgtagattctgctatcaaagtttatcagagagctctg
aaggctcttcctggttctgagatgctgaagtatgcttatgctgagctggaggaatcccgt
ggagcagtccagcctgcaaagaagatttatgagagcctgctgggcgatggtgtgaatgca
acagccctttcacatatacaatttataagatttcttagaagaagtgaaggagttgaagct
gcccgcaagtattttctggatgcccgcaagtcacctaattgcacttatcatgtatatgtt
gcatatgcaatgatgtctttttgtcttgacaaggatccaaaggttgctcataatatattt
gaagcaggattaaaacgtttcatgcatgagcctggatacatccttgaatatgcagatttt
ttgtcacgcttgaatgatgatagaaacatccgagctttgtttgaacgtgcactcaactca
cttccacctgaagaatctgttgaggtttggaagcggtttgcacaatttgagcaaacatat
ggagacctggctagcatgcttaaggttgagcaaagaaggaaagaggctctttcgaggacc
agtgatgatggaggtgtagcacaggagggttcactacaggaagtaatttcacgatacagt
ttcatggatctttggccatgttcatctaaggatttggataatttagcacggcaagcgtgg
ctcactatgaacatgaacagaaaagcggaaaaatctaacgtgccaaatggagtaactact
acaggtgaagagaagagtacttcaggagttactcctatgttggaccaatcgtccaaagtg
atttatcctgatgttacccagatgatgatatatgagcctgggcagaaacaagggtctaca
gttcttccaagtggaatggtaggtggccctcctaccgtctctactaccatgtcaacattt
gatgggattttaaaagcagctcctcctgcacttgtagcatttatagcaaatcttcctgcc
gtagaaggtcctgcaccagatgtagattttgtgctgtcaatatgtttgcaaagtaaccct
gtaaccggacaggcgtcaaagcatgtgccctcagcaggtcaagtacctgcagcagctgtt
tctggtataagtgagccttctggttcacacaaagcccgtccggctccaagtggttcatct
gtgagaatggcaagagatagacaatctggaaagaggaaagatgcagagagacaagatgat
gatgaaactgcttcaatgcagagctcacctcttcccaaagatgccttcagattgcgccaa
ttgcataaagctcgtggaggatcagcttcacaaacgggatcaacgtcgtatggcagtgca
ttttctggagaacagtctgggagcactagctga
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