Chenopodium quinoa (quinoa): 110709825
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Entry
110709825 CDS
T05764
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
110709825
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
110709825
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
110709825
NCBI-ProteinID:
XP_021743772
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSFKAVQLTIQDHYVVIDNGILEITISRPDGIITKIIYNGIENLLEDTVVEEHRGYWDLN
WSDPGTSGTRGYGERVKGTDFQVVVENDEMVEVSFTRTWIPSSKGKFVPLNIDRRVIMLQ
GSAGFYCYGIYEKLKEWPGFNLPQTRIVFKLNKKWFQYMAVADNRQRKMPLPDDRLPGRC
QVLEPPEAVLLTNPIEEEFKGEVDDKYQYSCEDRDLQVHGWICTDPPTGMWQITPSDEFR
TGGPFKQNLTSHVGPYNLAMFISAHYAGEDMVAKFAQGEAWKRVFGPVFTYVNCVPKEDD
WHWLWDDAKEQAVIETDRWPYSFPASEDYPTSDQRGNLSGRLLVHDRYFNDDYIPANGAY
IGLASPNEPKSWQLEGKGYQFWTTTDEDGYFFIDDIRAGDYNLYASVPGFIGDYVCDNNV
SVTQGLQTYSHLREINTVQNFLCLSILHYYINLVKMTYRKQAYTGFAIDMGELVYEPPSD
GPTLWEVGVPDRTARKFYIPEPNPKYVNKLFVNHPERFRQYGLWERYAELYPNEDLVYTI
GESDYEKDWFFAQVTRKKGNTYQGTTWKIKFNLEEVDQHGVYKLRLALATANMAELQVRV
NDPKAEPPVFTTGLIGKDNAIARHGIHGLYRLYTADIQGNKLVQGDNTIYLTQAKGGSPF
VGIMYDYIRLEGPPDSDQS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaaggcagtccaacttactatccaagatcattatgttgttatcgataatggg
atactcgaaatcacaatatcgagaccagatgggatcatcacaaagataatatacaatggc
atagagaatttgcttgaggacacagttgtagaagaacatagagggtattgggaccttaat
tggagtgatcctggaacttcaggcacaagaggctacggcgaaagagtcaaaggaacggat
tttcaagttgtagtagagaacgatgaaatggtggaagtgtctttcacaagaacatggata
ccttcatctaaaggcaaatttgtgccattgaacattgatagaagggtcataatgcttcag
ggttcagcaggcttctactgttatggtatttatgagaaattaaaggaatggcctggattc
aatcttcctcaaacaaggattgttttcaagcttaacaaaaagtggtttcagtatatggca
gtagcagataacagacaaagaaaaatgccacttccagatgacaggttaccaggaaggtgc
caagtccttgaacctcctgaagcagtgcttcttacaaatcctattgaagaagaatttaaa
ggagaggtggatgacaaataccagtattcgtgtgaggacagagatctccaagtccatgga
tggatatgcaccgatccccctaccggaatgtggcaaataacacctagtgatgagttcaga
accggtggaccattcaagcaaaatcttacctctcatgttggcccttacaaccttgctatg
ttcataagtgcacattatgctggggaggacatggtagcaaaatttgcacaaggtgaggca
tggaaaagggtgtttggtccggtttttacgtatgttaactgtgtgcctaaagaagatgac
tggcattggctgtgggatgatgctaaagaacaggctgtgatcgaaacagataggtggccg
tactcatttccagcttcagaagactatccaacatctgatcaaaggggtaatctctctggt
agattattagtccatgacaggtattttaatgatgattatatcccagcaaatggagcatat
ataggtttagcatctcctaatgaaccaaaatcttggcagctggaaggcaagggttatcaa
ttttggacaacaacagatgaggatggttatttcttcatagatgatataagagctggtgac
tataatctgtatgcttcggtccctggcttcataggagactatgtatgcgacaacaatgtt
tctgtaactcaaggtcttcaaacatactcccacttacgcgaaataaatacagtacaaaat
ttcctgtgcttaagcatcttacattactacataaatcttgtaaagatgacttacagaaag
caagcttatacaggttttgctattgatatgggtgaacttgtgtatgaaccaccaagtgat
ggaccgacattgtgggaagtcggtgttcctgatcgaacagcgaggaaattttacatacct
gagcccaaccctaagtatgtcaacaaactctttgtcaatcaccctgaaagatttaggcag
tatggtttatgggaaagatatgccgaattatatcctaatgaagatctggtgtatacaatt
ggtgaaagtgattatgaaaaggattggttctttgctcaagttaccaggaagaaaggaaat
acataccaaggaacaacatggaaaatcaagttcaaccttgaagaagttgatcaacatgga
gtctataaactaagattggcacttgcaactgcgaacatggcagaattacaggttcgagta
aacgatccaaaagcagaacctccggtatttacaacaggactaatagggaaagataacgcg
attgcaagacatgggattcatgggctatataggctttatactgcagatatacaaggaaat
aagcttgtacaaggtgataatacaatctatttgactcaggcaaagggtggtagccctttt
gtaggaatcatgtatgactatattcgcctcgaagggcctcctgattctgatcaaagttga
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