Chenopodium quinoa (quinoa): 110710155
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Entry
110710155 CDS
T05764
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
cqi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110710155
03083 Polycomb repressive complex
110710155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqi03036
]
110710155
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
110710155
Histone modification proteins
HAT complexes
HATB complex
110710155
HDAC complexes
Sin3A-HDAC complex
110710155
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
110710155
PRC2.2
110710155
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
110710155
Heterochromatin formation proteins
Other heterochromatin formation proteins
110710155
Chromatin remodeling factors
NuRD complex
110710155
NuRF complex
110710155
NuRF complex (fruit fly)
110710155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD_LRWD1
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110710155
NCBI-ProteinID:
XP_021744108
UniProt:
A0A803LYR6
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDERSDMGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYIFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPRNKNLDAMQIFKVHEGVVEDVSWHLRHE
YLFGSVGDDQYLLIWDLRAPSVTKPVQSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKLNTALHTFDCHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLSTDDA
TAVKGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgaggaagagatgagaggggagattgaagagaggttgataaatgaggag
tacaagatatggaagaagaataccccgtttttgtatgatttggtgatcactcacgcactt
gaatggccgtctcttactgttgagtggctccctgatcgagatgagcctcccgggaaggat
tactcggtgcagaagatgattctgggaacccatacttctgagaatgagccgaattatctt
atgttggctcaggttcagctccctcttgaagatgctgagaatgatgcccggcattatgat
gatgaacggtctgatatgggtggatttgggtgtgccaatggaaaggtacaaattatacag
cagataaaccatgatggagaggttaatcgggcccgctatatgcctcagaatccattcata
attgccaccaaaacagtgagtgcagaagtatatatattcgactacagtaaacatccatca
aagccaccactagatggtgcatgtaaccctgatttgaggttacgtggccacagcactgaa
ggttatggtttgtcgtggagtaaatttaagcagggccatttattgagtggttctgatgat
gctcagatttgtctttgggacataaatgcaactcctagaaacaaaaatctggatgctatg
caaatatttaaggttcatgaaggtgttgttgaagatgtttcatggcatttgagacatgaa
tacttatttggttccgtcggagatgatcagtatcttcttatatgggaccttcgagctcca
tcagttaccaagcctgtccagtctgttattgcacatcaaagtgaggtgaattgcttggct
tttaatccctttaatgaatgggttgtggctacgggttcaactgataagactgtcaagttg
tttgatctaaggaaactcaacactgcactgcatacttttgattgtcacaaggaggaggtc
ttccaagttgggtggagtcctaaaaatgagactatcttggcttcgtgttgtcttggtagg
agactgatggtgtgggatctcagcagaattgacgaagagcaaaccccagaggatgctgaa
gatggtccgccggagttgctcttcattcatggaggccataccagcaaaatctccgacttc
tcatggaatccgtgtgaagattgggttgttgctagtgttgccgaggataacattcttcaa
atatggcagatggctgagaacatataccatgacgaagatgatttatcaacagatgatgca
actgccgtcaagggctcttag
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