Chenopodium quinoa (quinoa): 110710718
Help
Entry
110710718 CDS
T05764
Name
(RefSeq) uncharacterized protein LOC110710718 isoform X1
KO
K06100
symplekin
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110710718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110710718
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110710718
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110710718
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110710718
U7-dependent histone pre-mRNA processing factors
110710718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT
HEAT_2
USP_UIM_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
110710718
NCBI-ProteinID:
XP_021744744
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MVGLMAAGSEERIQSLIDAITFAADTPSKLENLHQLKQELLGLEDDTTVSFSDFLPSLLR
LLSDCFSPVRKCVTEVIGEIGLRHLEVLPEITTALLTVVDDDTPAVARQAITSGTNIFCC
TMEKIALQGLNASKLDDSLESAWEWMLKLKEKICSIAFESGSDGKRLLALKFVAAIILIY
TPDPNGGTELPSHLISDGNAVGKEAGFSISCVRRGHPLLKLGDLSIEASQSLRLLLDQLR
LPIVKSLSTSMVVVLINCLSAIAVKRPSFYGRILPVLLGLDPSNSVIKGLHAYGVQNALK
NAYLSCLKCAHPSATPWRDRLVGALKEMNAGHMAEKALESMCSNNGNVKEEKAELVAVKE
EQSLEVHDPVHNKVGRKRSSDLEVGDRNEDDDTPGKRARSMHSVSEELSDKSGDLRSSVE
IKSDSPGVASASKEDDLGPVQQLVGLFGALVAQGEKAAASLEILISGISADLLAEVVIWN
LRNLPSTCPKAEGDEELQANFGLRYNKVDTDTPFDQLSSFLTNAVHCSSSELISAAADVK
PPVSLDIEHPLLEETHAMDVADNIVGCATSKSSTELVDSDMPCAFASGNLFEVPKGSAVT
CEFQDMGPSDNAIPGLDNAHSDGFLDTVASSSLASTDRDDGSQDQVTSVGKSFKIESLPS
VSTEKSEELSSKAAAADANIGMASTASSLGPVHQFVLPKLSAPVIDLSSEDKDKLQKLVF
LRIVEAYKQVAVSGGSQLRFSLLSYLGVELSLDLDLWTCLQTHILSDYINHEGHELTLRV
LYRLYGEAEEERDFFSSTTASSVYETFLLKVAETLRDSFPPSDKSLSCLFSEVPYLPKSS
LKLLECLCSPEIGDKDEKELHNGDRVTQGLSAVWSLIMLRPTLRDVLLKIALQSAVHHME
EVRMKAIRLVANKLYPLPSISLQIEEFAKEKLLTVENTHSADAEKSSIQSQKSLEITLAA
KDQSTGETMAIESSAHNSPPCTPGIVASTSVSEAQQCMSLYFALCTKKHTLLRQIFIIYK
SSPESAKQAIHSQMPILIRTMGASPPLLEIISDPPDGSENLLMQVLHTLTDGRVPSAELI
FTIKKLYETKLKDIEILFPILPFLPKEEVLRVFPHAVNLPQDKFQAALARLLQGSTPNPV
LTPSEVLIAIHSIDPDKDGIPLKKVTDACNACFEQRQMFTQQVIAKVLNQLVEQIPLPLL
FMRTVLQAIGAFPALVDFIMDILSRLVSKQIWKYPKLWVGFLKCAQLTQPHSFTVLLQLP
QAQLEAALNKIPALKAPLAAHANQQNIKSSLPRSVLTVLGIASDSQAGSQSQSAQPEAED
AGSSDKDVVPEKSKESSSGS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtgggattaatggcggctggttctgaagaaagaattcagagtctcattgatgcaatt
acctttgctgctgataccccttcaaagctcgaaaacttgcatcaacttaagcaggaattg
ttgggcttagaagatgatactactgtttctttctctgatttcctcccttctttgttgagg
cttctttcggattgttttagccctgttcgtaaatgtgttaccgaggtaattggtgaaatt
gggttgaggcatttggaggttttacctgaaattacaactgcactgttgactgttgttgat
gatgatactccagcagtggcccggcaagctattacatctggcactaatatattttgctgt
accatggagaaaatagcattacaggggctaaatgcaagcaagttggatgattctcttgag
tcagcgtgggagtggatgctgaagttgaaggaaaagatatgttcaatagcttttgagtct
ggaagtgatggaaaacgattgttggctctgaaatttgttgcagccatcattcttatttat
actccagaccccaatggtggtactgagcttccatctcatcttattagtgatggtaatgct
gtaggtaaggaagcagggttcagtatctcatgtgttcgtagagggcatcctcttctgaag
cttggggatctgtcaattgaagccagtcaaagtttgagattattgcttgatcagcttcgc
ctccccatcgtgaaatcgctcagcacctccatggtggttgtgctcattaattgtttgtca
gccattgctgtgaagaggccatccttctatggacgaattcttccagtccttctgggtctg
gatccttcaaattctgttatcaaggggttgcatgcttatggagtacaaaatgctttaaag
aatgcatatctctcttgcttgaagtgtgcacaccctagtgctacaccgtggcgggatcga
ttagttggtgctttgaaggaaatgaatgctgggcatatggcagaaaaagcccttgaaagc
atgtgcagtaacaatggaaatgtgaaggaggaaaaggctgagctagttgctgttaaggag
gagcagtcacttgaagtccatgatccagtgcataataaggtgggtagaaaaagatccagt
gacctggaagttggtgacaggaatgaagatgatgatacacctggaaaacgtgcccgatct
atgcacagtgtatcagaggagctgagtgataagtcaggtgatcttcgttcttctgtcgaa
attaagtctgattcacctggggtggcaagtgcatcgaaagaagatgatttggggcctgta
cagcaacttgttgggctttttggtgccctggttgctcaaggtgaaaaggctgctgcatct
ttggagatacttatatcaggtatctctgctgacttacttgcagaagtggttatatggaac
ttgagaaaccttccttctacttgcccaaaggctgagggagatgaagaactgcaagcaaat
tttggtttgcgttacaataaagttgatactgataccccctttgaccaactttcatcattt
ttgacaaatgctgttcactgtagcagttccgagctcatatctgcagcagctgatgtcaaa
ccaccagtgtcacttgacattgagcatccgcttctagaagaaactcatgctatggatgtt
gctgataacattgtgggatgtgctacgtcaaaaagttcaactgagcttgttgattcagat
atgccatgtgcttttgcttctggtaatctttttgaagtacccaaagggtcagctgttacc
tgtgagtttcaagatatgggaccttcagataatgccattccgggcttggataatgctcat
agcgatggattcctggacactgttgcttcttcatcgttggcctccacagatcgggatgat
ggcagccaagatcaagttacaagtgttgggaaaagttttaaaatagaatcacttccatca
gtgtcaactgagaagtctgaggaacttagctctaaagctgctgcagcagatgcaaacata
gggatggcctctacagctagttcccttgggccagttcaccagtttgtcttgcctaagctc
tcagcacctgtgatagacctttctagcgaggacaaggataagcttcaaaaactggtattt
ttgcgcattgtggaagcatacaagcaggttgctgtctctggaggttcacagcttcgattc
tctttactttcttatttgggagttgagctctcattggaccttgacctttggacatgtcta
cagacacacatattgtcagattacataaaccatgagggacatgagttgacattacgtgtc
ctctatcgattgtatggggaggcagaagaagagcgtgactttttttcttccacaactgct
tcttctgtatatgaaacttttcttctaaaagtggcagaaacactgagagattctttccca
ccatctgacaaatctttgagttgtttgttcagtgaagttccatatttgcccaaatcgagc
cttaaattattggaatgcttgtgttcacctgagattggagataaagatgaaaaagaattg
cacaatggagatcgggttactcaaggtctcagtgctgtgtggagtttgataatgctgagg
ccaactctccgtgatgtgctgttgaaaattgctttgcagagtgcagtgcatcatatggag
gaagttcgtatgaaggcaatacgtttggttgcaaataaattgtatccattaccgtcaatt
tccctgcaaatagaagaatttgctaaggagaagctgcttactgtagaaaatactcatagt
gcagatgctgaaaaatcaagtattcaatcacaaaagagtcttgaaataactttggctgcg
aaagaccaatctacaggggaaacaatggccatagaatcatctgcccataattccccgcct
tgcacacctggaattgttgccagtacttccgtatctgaagcacaacaatgcatgtcactg
tattttgccctatgtacaaagaaacatactcttcttcgtcaaatatttatcatatataaa
agctcaccagagtcagcgaaacaggcaattcatagccagatgcctattcttattcggact
atgggtgcatcaccacctcttcttgagattatctctgatccacctgatggaagtgagaat
cttctgatgcaggttttgcatactcttacagatggcagggttccatctgcagaattgata
tttactattaaaaaactttatgagacaaagttaaaggatatagagattctgtttccaata
ttgccctttctaccaaaagaggaggtgttgagggtcttccctcatgctgttaatctcccc
caagacaagttccaggctgctctggcacgcttgctgcagggttcgactcctaatcctgtg
ctaactccatcagaagtgttaattgccatccacagcatagatcctgataaagatggaatt
cctttgaagaaggtgactgatgcatgtaatgcttgctttgagcaaagacaaatgttcaca
cagcaagtaattgccaaggttctgaatcagctggttgaacagattcctcttccattgttg
ttcatgagaacagtactacaagcaatcggtgcttttccagctttggtggacttcataatg
gatatcctttctcgacttgtaagcaagcagatatggaaatacccaaagttatgggttgga
tttctcaaatgtgcacaattgacacagcctcattcttttaccgtgttgcttcagttgcca
caagctcagcttgaagctgctctaaataaaattcctgcactcaaagcacctctggctgct
catgcaaaccagcagaacattaaatcttctctcccaaggtctgtacttactgtacttggc
atcgcctctgattctcaagctggaagtcagtcgcagtcagcccaacctgaggctgaggat
gcaggcagctctgacaaggatgtcgtcccagagaaaagtaaagaatcatccagtggaagc
tag
DBGET
integrated database retrieval system
