Chenopodium quinoa (quinoa): 110710979
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Entry
110710979 CDS
T05764
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110710979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110710979
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110710979
mRNA degradation factors
5'-3' decay
Decapping complex
110710979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
110710979
NCBI-ProteinID:
XP_021745022
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MASTGNPNQQQQQQAAPQQQPQGGSGGVGGGGGGQFDMNKFFKPSNLPSAPPPPQPAQNP
NNYGPPTPSASYPPPTAGPYSFPPQNPTPPYYHHMPNYPPQDQMHHQRSVSFPTPPLQPV
PSAPPQSPSPGARLMALLSSPPPDFNYSHQPPAPVPAPMPSSSEYSMPPSVPVSPTVQPM
QSIHAVVQPAPIRMPSSKLPRGRHLVGDHMVYDIDVRSLGEEQPQLEVTPITKYVSDPGL
ILGHQIAVNKTYICYGLKLGNIRVLNINTALRALLRGHTQRVTDMAFFAEDVHLLASASI
EGRIYVWKISEGPGKEDKPEISGNIVLAIHITGNEGSVHPRVCWHCHKQEILVVAIGKTV
LKIDTTKVRKGVEFSGEEALACPLDKLIDGVQLVGKHEGEVTDLSMCQWMTTRLVSASKD
GTIKIWEDRKAAPLLVLRPHDGHPVDAAKFLAAPHRPDHIMLITAGPLNREVKLWASSDE
EGWLLPSDAESWRCIQTLELTSSAEPEAEEAFFNQVVALSQGGLLLLANAKKNAIYAIHL
EYSATPAATRMDYLSGFTVTMPILSFTATSDVLPHGEHLVQVYCVQTQAIQQYALDRSQC
LPPPLENLSLEKSESTVSRDAAECIPGLEPSGSKSFEVPYSAAKPSNHISGLGSSPEIKC
PVNDASDATSVQDITTANVDSNSTSLLPTSSNADVVSVAPPPLPPSPRLSKKFSDLCGDQ
AATDYPVDRQMDSAQTSSSALPASNEDSRTVQGNTSDAVPTMFKHPTHLVTPFEIMATSS
ADATRVSENGENEAKIQDDVVSKDAGNAEVEVKVVDETGFGKSVESSRQVDPQVIPDRKE
KSFFSQASDLGADMSRECCALPSETSIMEEARNSIMEALAQPSNSGEDEGDEANSDVSRK
AADYAASTLVPQSPTPGAKGKKQKGKNSQASGSLSPSPSVSNAADLFQAGSGVQFVEPSS
SQMLAMHETLNQILNAQKEMQKQMSTVVSTPITKEGRRLEAALGRSIEKASKANTDALWA
RTQEEITKLEKSLRDRMQQIHGLVNNMVNKDFLAVLERTLKKELAAVGTNVARTISPVIE
KTISSAITDSFQRGVGDKAVNQLEKSVTSKLEATVARQIQTQFQTSGKQALQDGLRSCLE
ASIIPAFEMSCKAMFEQVDSAFQKGMSEHTAAAQHQIESTNSQLALTLRDALTSASSLTQ
TLSGELADNQRKLFAIAAAGANSKAGNTLATQLSNGPLPGLHEKVEQPFDPTKELSRLIS
EHKYEEAFTAALQRSDVTIVSWLCSQVDLQRLLSTMPLPLSQGVLLSLLQQLSCDITKDT
ARKLAWMTDAAACIHPHDPMIAVHVRPILEQVYQILNHQRSLPTTSSSELSSIRVVMHVI
NAMLLTCK
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactgggaatccaaatcaacaacagcaacagcaggcggcgccgcagcagcaa
ccacaaggcggcagcggcggtgtaggaggaggaggaggaggtcagttcgatatgaataag
ttcttcaaaccctcgaatctaccgtcagcaccaccaccaccccaaccggcgcaaaaccct
aacaattacggacctccaactccatccgcttcgtaccctcctccgactgctggcccctac
tctttcccacctcaaaaccctactcctccttattaccatcacatgcccaactatcctcct
caagatcaaatgcatcaccaaaggtctgtttctttccctactccccctcttcagcctgtc
cctagtgctcctcctcaatcccccagccccggtgcccgtcttatggccttgcttagtagt
cctcctcccgatttcaattactctcatcaaccccctgctcctgttcctgctcctatgccg
tcctcgtccgaatattctatgcctccttctgttcccgtctctcctactgttcagcctatg
cagtccattcatgctgttgttcagcctgcccctattcgtatgcctagcagtaagcttccc
aggggacgacatctagttggtgatcatatggtttatgatatcgatgttaggtcccttggc
gaggagcagcctcagttggaggttactcccattaccaagtatgtctccgatcctggcctc
atccttggtcatcaaattgctgtcaacaaaacttatatatgctatggccttaagctggga
aatattcgtgttcttaacattaataccgccttgagggctcttcttcgaggtcacactcag
agggtaacagatatggccttctttgcggaagacgttcatcttctggctagtgcaagcata
gaggggcgcatttatgtatggaaaatttctgaaggcccaggtaaggaagataagccggaa
atttctggaaatattgtgctagctattcatataactgggaatgaaggatctgttcatcca
cgagtttgctggcactgtcacaaacaagaaattctggttgtggccattggaaaaactgtc
cttaaaattgatactacaaaggttcgcaagggtgttgaattttctggagaggaggctctt
gcatgtcctttggacaagctgattgacggggttcagctagttggtaaacatgaaggggag
gttaccgatctatcaatgtgccaatggatgacaactcgtttggtttcagcttccaaggat
ggaacaattaagatttgggaagatcgcaaggcagcgccacttctggtattgaggccccat
gatggtcatcctgttgatgcagccaagtttttggctgccccacaccggccagaccatatc
atgttaatcacagctggaccacttaatcgagaggtaaagctttgggcttcttctgatgaa
gaaggatggttgctgcctagtgatgctgaatcttggcggtgcatacagacattagagctg
acaagctctgctgaacctgaagctgaggaagcttttttcaatcaggtcgtggccttgtct
caagggggacttcttttactagcaaatgccaaaaagaatgctatatatgcaattcattta
gaatatagtgctactccagcagcaacccggatggattatttatcagggtttacagtcact
atgcctatcctaagctttactgctacaagtgatgtcttacctcatggggaacacctagtt
caagtttattgtgtccagacacaagccatacagcagtatgctttggaccgctcacaatgc
ttgccaccaccattggaaaacttgagtttagaaaaatcagagtccactgtttctcgcgat
gcagctgaatgcattcctggcttagagccatctggaagcaagtcttttgaggttccctat
tctgcagccaaaccaagtaaccatattagtggtctagggagctcacctgagattaagtgt
cctgtgaatgatgcttctgatgcaacatccgttcaggatatcactactgcaaatgtggat
tccaactctacttcattattaccaacatcgagcaatgctgatgttgtgtctgttgcacca
cctcctcttcctcctagtccaaggttatctaaaaaattcagtgatttgtgcggtgatcaa
gctgctactgattatcctgttgataggcaaatggatagtgcacagactagttcatcggct
ttgcctgcctcaaatgaagatagccgaactgtacaagggaatacttctgatgctgtccct
accatgtttaaacacccaactcatcttgttactccttttgagattatggctacatcttca
gctgatgcgacccgtgtttctgaaaatggtgaaaatgaggctaaaattcaagatgatgtc
gtgagtaaagatgcaggaaatgctgaggttgaggttaaagttgtagatgaaactggattt
ggtaaaagtgttgagtcttctcggcaagtagatcctcaagtcataccagacagaaaggaa
aaatctttcttttcacaggcatcagatctgggggctgatatgagtcgagagtgttgtgca
ttaccatctgagacatctataatggaagaagctagaaatagcataatggaggctctagcg
caaccttcaaactcaggtgaggacgaaggagatgaagccaacagtgatgtgtctaggaaa
gctgcagactatgctgcttcaacactggtgccacagtctcctacaccaggtgccaaaggg
aaaaagcagaagggaaagaactctcaagcatctggttcattatctccttcaccaagtgtt
tcaaatgcagcggatttgtttcaagcaggttcgggtgtgcaatttgtggagccttctagt
tcacagatgctggctatgcacgaaactcttaatcagatattaaatgcgcagaaagaaatg
caaaagcagatgagtacagttgtttctacaccaattactaaagaaggtagaaggctagag
gcggctttaggacggagcatagagaaggcttcaaaggccaatactgatgctttatgggct
cgcacacaggaggagattactaaacttgagaagtcgttacgagatcgtatgcagcaaatt
catggtttggtaaataacatggtgaacaaggactttcttgctgtgcttgagagaacattg
aagaaagaattggctgctgttggcacaaatgtagctcgtacaataagtccagttatcgag
aaaacaatttcttcagctattacagattccttccagagaggggttggtgacaaggctgtg
aatcaattggagaaatctgtaacctcgaaacttgaagctactgttgccaggcaaatccaa
actcagttccagacttctggcaaacaagcacttcaggatggattgaggtcttgtttggag
gcttctattattcctgcttttgagatgtcctgcaaagcaatgtttgagcaagttgattct
gcattccagaagggaatgtctgaacatacagcagcggcacaacatcaaattgaatcaaca
aattctcagctagcccttacccttagggacgctctaacttcagcttcatcgctgactcaa
accttgagcggagaattggctgataatcagaggaagttgtttgctattgcagctgctggt
gcaaactccaaagcaggaaatacgctggccacccaattgagcaatggacctttgccgggt
ctacatgagaaggttgagcagccatttgatccgacaaaagagctatctagactcatctct
gaacacaaatatgaggaggcatttactgcagctttgcaaagaagtgatgtaaccatcgtc
tcctggttatgctcacaggttgatctacagcgtcttttgtcaacgatgccattgcctttg
agtcaaggtgttttactctcacttcttcagcagctttcttgtgatataacaaaggataca
gctaggaagttagcgtggatgacagatgccgctgcatgcatacacccgcatgacccaatg
attgcagtgcatgtgcgtccgattttggagcaggtttaccagatattgaaccatcaacgt
agccttcctactacctcatcctcagagttgtcgagcatccgggttgtcatgcacgtcatc
aacgccatgttgctgacctgtaaatga
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integrated database retrieval system
