Chenopodium quinoa (quinoa): 110711943
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Entry
110711943 CDS
T05764
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110711943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110711943
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110711943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
CagL
Motif
Other DBs
NCBI-GeneID:
110711943
NCBI-ProteinID:
XP_021746072
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MREGEVVVLANGADDNPQEGERLADYVVDVYPLNRYYFGSKDALSTKDETIADSLLRLKS
NYEARGLRTNVQAVILVELFKHPHLLLLQVKNRTFDLPGGRLKQGESDLEGLRRKLSRKL
SLDEGSDEVEWEVGDCLGMWWRPDFETVLYPYLPPNIKQPKECAKLFLVKLPVSRKFIVP
KNLKLLAVPLCQVHDNHKTYGPIIAGIPQLLSKYSFNMIEA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaggagaagtggtcgtacttgctaatggcgccgatgacaacccacaagagggt
gagagattagcggattatgtggttgatgtttaccctttaaaccgctactattttgggtct
aaagatgctctttctactaaggatgaaacaattgctgactcgcttcttcgcttgaaatct
aattatgaagctcgtggattaaggactaatgttcaagctgttattttggttgagttgttt
aaacatccacatctcttattgttacaagtgaagaatcgaacttttgaccttcctggaggc
cgcttaaagcagggtgaatcagatcttgaaggattgcgtcgcaaactttcaaggaagcta
tctcttgatgaaggcagtgatgaggtagaatgggaggtgggagattgcttgggaatgtgg
tggaggccagattttgagaccgtgctctacccatatttgccccctaatattaagcagccc
aaggagtgtgccaagctatttttggtgaagttgccagtaagtcgaaaattcattgtgcca
aagaacctaaagttgctcgctgttccgttatgtcaggttcatgacaaccacaagacatat
ggacccataatagctgggatcccgcagctattatcaaagtattcgttcaacatgatcgag
gcttaa
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