Chenopodium quinoa (quinoa): 110712144
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Entry
110712144 CDS
T05764
Name
(RefSeq) RNA polymerase sigma factor sigA-like isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110712144
Transcription machinery [BR:
cqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110712144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
DUF4423
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
110712144
NCBI-ProteinID:
XP_021746267
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MFRLKMATAAVVGLSAGKGLLSSSFYYSDLTERLSYSTGEQHQISPSKNVIVAKANFNQR
GSSVKALKECVDGATIPPITEPWISRSSPVEEETLDPETPLEALLLLQKSMLEKQLELSF
ERTGTNDVLRENNSKERVTSSGTPARVRRINARKRSQGKKISTKESKREKPLVTTVSPEL
LQNRSIGYVRGMTNDVLLTHSQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSL
RMNRAEVRSKLIECSLAREKLAMSNVRLVMSIAQKYENMGADMADLVQGGLIGLLRGIEK
FDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKNKLEEKGIDPS
IDRIAESLNLTHKKVQNATEAVRSVLSLDREAFPSLNGLPGETYHSYIADNRLENNPWHG
VDEWTLKQDVSNLIDSTLRQREKAIIRLYYGLDEKSLTWEEISKRIGLSRERVRQVGLVA
LEKLKLAARKRRMDALLVKH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggcttaagatggccacggctgctgtcgttgggcttagtgctggcaaagggctt
ttgagctcctctttctattattctgatctcaccgaaaggctctcttattctactggggaa
cagcatcagatttctccctcaaagaatgtgattgttgcaaaagctaattttaatcaacga
ggatcatcagtcaaggctcttaaagaatgtgtagatggtgcgacaattcctccgattact
gaaccatggatttcaagatcttctcctgtagaagaggagactttggatcctgaaactcca
ctggaagctctacttttacttcaaaagtctatgcttgaaaagcagttggagttatccttt
gaacgcactggtacgaatgatgtgcttagggagaataattctaaggagcgtgtcacatca
tcaggaaccccagctcgagtacgaaggataaatgctaggaagagaagtcagggaaagaag
atatccacaaaagaaagcaagagagagaagcctctagtgactaccgtaagtcctgagctt
ctccagaatcgttcgatagggtatgtgagaggtatgacaaacgatgtattgctgactcat
tcccaagttgtgaatttatctcgaaagattgaagctggtctatccttggaggagcataaa
tcaagactgaaagagaaactagggtgtgaaccttctgatgagcaacttgcgaactcctta
aggatgaaccgtgctgaagtaagatccaaactaattgagtgttcgctggccagagaaaaa
ttggctatgagcaatgtacgcttggtcatgtcaattgctcaaaagtatgagaacatgggt
gctgacatggctgaccttgtacagggtggattgattggactactccgtggaattgagaag
tttgattcctccaaagggttcaaaatttcaacatatgtttactggtggatacgtcaaggt
gtttccagagcactagtggaaaattcaagaactttgaggttacctactcatctccatgaa
agactaagcttaattcgcagtgcaaaaaataaacttgaagagaaagggatagatccatca
attgatagaattgctgaatctttaaacttaactcataaaaaagttcagaatgctacagag
gctgtcagatctgtcttgtcattggacagggaagccttcccttctttaaatggactccca
ggagagacttatcatagttatattgcggataatcgtctcgagaataacccatggcatggt
gtagatgaatggacactcaagcaagacgtaagcaatcttatagactccacactcaggcaa
cgagagaaagctataatacgtctttactatggcctggatgaaaaatctctgacttgggaa
gaaatcagcaaaaggattggtttgtcaagagaaagagtccggcaggttggattagtcgcg
ttggagaaactaaaacttgctgcaagaaagcgaaggatggatgccttgttggtgaaacac
tag
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