Chenopodium quinoa (quinoa): 110712526
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Entry
110712526 CDS
T05764
Name
(RefSeq) LOW QUALITY PROTEIN: sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110712526
09123 Folding, sorting and degradation
03018 RNA degradation
110712526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110712526
03041 Spliceosome [BR:
cqi03041
]
110712526
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110712526
mRNA degradation factors
5'-3' decay
Lsm complex
110712526
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110712526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
110712526
NCBI-ProteinID:
XP_021746684
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MSAGPGLEPLVDQMISVITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLG
LYIIRGDNISIIGELDEDLDAHIELSQVRGHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctggacctggacttgagcctcttgtagatcagatgatctcagttattaccaat
gatggacgcaacatagtgggaatcttaaaaggttttgaccaggcaacaaatattattctt
gatgaatcacatgagagggttttttctaccaaggaaggagtccaacaaattgtattgggt
ttgtacatcatcaggggtgacaacataagcattattggtgagctagatgaagacttagat
gctcatattgagctatcgcaagtgaggggccatcctctgaagcctgtcattcactga
DBGET
integrated database retrieval system
