Chenopodium quinoa (quinoa): 110713133
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Entry
110713133 CDS
T05764
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cqi03009
]
110713133
Ribosome biogenesis [BR:
cqi03009
]
Eukaryotic type
90S particles
Other 90S particles
110713133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Ge1_WD40
VPS8_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
110713133
NCBI-ProteinID:
XP_021747294
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSGRNHKKRPLLSGRRAAATPALAKGRASSFAKQNNSKRRRKFDSSEEENGFDGEIASDM
SDGGDDFFEDESNGGVKEKTEEEEKEEELERETVDERRRRLAWELVQKVRKGEEEEREED
EDDDDDDEREERGGIRDSLVAKILQQEQLEDSGRTRRLIASKLQKLEDKEEPEFLFKHRQ
SVTAVALSDDDRRGFSASKDGGIAHWDVEIRKAEKYLWPSEDVLKSHGVKDPQGQSNKKG
KVMKHSKDILALAVSSDGRYLATGGFDRHVHLWDTRTREHIQAFPGHRGPVSCLTFRQGT
SEIFSGSFDRTVKIWNAEDRAYITTLFGHQSEVLSIDCMRKERALTVGRDRTMQLYKVPE
ESRLVYRSSTSALECCCFAGNDEFLSGSDDGSIELWSVLRKKPVSIVKNAHTLSALKKQV
ELNSNGVMSNGQIDSSEFKASSPCSNAQSWVSSVTVCRNSDLAASGAGDGFVRLWQINSE
TKAVAPLFDVPLVGYVNSLAIAKSGRFLVAGVGQEPRLGRWDRISTARNGVALQSFKLTS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaaaccataaaaaacgacctttgctttctgggcgaagggcggccgccact
cctgcccttgctaagggacgagccagttcattcgcaaagcagaataactcgaaaaggcgg
cgcaaatttgatagcagtgaagaagaaaatgggtttgatggtgagattgcgagcgacatg
tcggatggtggggatgatttctttgaggatgaaagtaatggtggggtgaaggagaaaaca
gaggaggaggaaaaggaggaggagttggagagagaaactgtcgacgagcgaaggcggcga
ttggcatgggaacttgttcagaaagtgaggaaaggtgaggaggaagaaagagaggaggat
gaagatgatgatgatgatgatgagagggaggagagaggtgggattagggattctcttgtt
gctaagattttgcagcaggagcagcttgaagatagtggtagaactcgtagattgatcgct
tccaaattacagaagttagaagataaagaagaaccagagtttttatttaagcatcggcaa
tctgttactgctgtagctctgtctgatgatgatagaagagggttttcagcttcaaaggat
ggtggtattgcccactgggatgttgaaattagaaaagcagaaaaatatctttggccctct
gaagacgtcttgaagtcccatggtgttaaagatccacagggtcaatcaaataagaagggt
aaagtaatgaagcatagtaaggatatcctagcattggctgttagttctgatggccgttat
ctagctaccggtggttttgatcgtcatgttcatttatgggatacacgtacacgggagcat
attcaggcttttccaggtcatagaggacctgtgtcatgtttgacatttaggcaagggact
tcagaaatcttttctggttcatttgatcgaacagttaagatttggaatgctgaagataga
gcgtacataacaacattgtttggtcatcaaagtgaggtgttaagcattgattgtatgaga
aaagaacgggcattgactgttggacgtgatcgaactatgcagttgtataaggttccggag
gagtcacgtctggtttaccggtcttctacttctgctcttgagtgctgttgctttgctggt
aatgatgaatttttgtctggatctgatgacggaagcattgagctgtggagcgtattgcgt
aaaaagccggtctctattgtaaaaaatgctcacactctgtctgcattgaagaagcaagta
gagctaaatagcaacggagttatgtctaatggtcagattgatagtagtgaatttaaagca
agtagcccatgctcaaatgcacagtcctgggtcagctctgtcactgtatgcaggaatagt
gaccttgctgcatccggtgctggagatgggtttgttcgattatggcaaatcaacagtgag
accaaagctgttgcacccttatttgatgttcctttggtggggtatgtgaattccttggct
attgcaaaatctggtagatttcttgttgctggagttgggcaggaaccacgtcttggaagg
tgggatcgtatatctacagctagaaatggtgttgctttgcaatccttcaagcttacatca
tag
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