KEGG   Chenopodium quinoa (quinoa): 110713133
Entry
110713133         CDS       T05764                                 
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cqi  Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cqi03009]
    110713133
Ribosome biogenesis [BR:cqi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    110713133
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML WD40_Gbeta Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st NBCH_WD40 DSE1_N Beta-prop_WDR41 Beta-prop_SPT8 PAC11 Beta-prop_NOL10_N CFAP251_N Beta-prop_SCAP ASA1 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 110713133
NCBI-ProteinID: XP_021747294
LinkDB
Position
Unknown
AA seq 540 aa
MSGRNHKKRPLLSGRRAAATPALAKGRASSFAKQNNSKRRRKFDSSEEENGFDGEIASDM
SDGGDDFFEDESNGGVKEKTEEEEKEEELERETVDERRRRLAWELVQKVRKGEEEEREED
EDDDDDDEREERGGIRDSLVAKILQQEQLEDSGRTRRLIASKLQKLEDKEEPEFLFKHRQ
SVTAVALSDDDRRGFSASKDGGIAHWDVEIRKAEKYLWPSEDVLKSHGVKDPQGQSNKKG
KVMKHSKDILALAVSSDGRYLATGGFDRHVHLWDTRTREHIQAFPGHRGPVSCLTFRQGT
SEIFSGSFDRTVKIWNAEDRAYITTLFGHQSEVLSIDCMRKERALTVGRDRTMQLYKVPE
ESRLVYRSSTSALECCCFAGNDEFLSGSDDGSIELWSVLRKKPVSIVKNAHTLSALKKQV
ELNSNGVMSNGQIDSSEFKASSPCSNAQSWVSSVTVCRNSDLAASGAGDGFVRLWQINSE
TKAVAPLFDVPLVGYVNSLAIAKSGRFLVAGVGQEPRLGRWDRISTARNGVALQSFKLTS
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgtcaggaagaaaccataaaaaacgacctttgctttctgggcgaagggcggccgccact
cctgcccttgctaagggacgagccagttcattcgcaaagcagaataactcgaaaaggcgg
cgcaaatttgatagcagtgaagaagaaaatgggtttgatggtgagattgcgagcgacatg
tcggatggtggggatgatttctttgaggatgaaagtaatggtggggtgaaggagaaaaca
gaggaggaggaaaaggaggaggagttggagagagaaactgtcgacgagcgaaggcggcga
ttggcatgggaacttgttcagaaagtgaggaaaggtgaggaggaagaaagagaggaggat
gaagatgatgatgatgatgatgagagggaggagagaggtgggattagggattctcttgtt
gctaagattttgcagcaggagcagcttgaagatagtggtagaactcgtagattgatcgct
tccaaattacagaagttagaagataaagaagaaccagagtttttatttaagcatcggcaa
tctgttactgctgtagctctgtctgatgatgatagaagagggttttcagcttcaaaggat
ggtggtattgcccactgggatgttgaaattagaaaagcagaaaaatatctttggccctct
gaagacgtcttgaagtcccatggtgttaaagatccacagggtcaatcaaataagaagggt
aaagtaatgaagcatagtaaggatatcctagcattggctgttagttctgatggccgttat
ctagctaccggtggttttgatcgtcatgttcatttatgggatacacgtacacgggagcat
attcaggcttttccaggtcatagaggacctgtgtcatgtttgacatttaggcaagggact
tcagaaatcttttctggttcatttgatcgaacagttaagatttggaatgctgaagataga
gcgtacataacaacattgtttggtcatcaaagtgaggtgttaagcattgattgtatgaga
aaagaacgggcattgactgttggacgtgatcgaactatgcagttgtataaggttccggag
gagtcacgtctggtttaccggtcttctacttctgctcttgagtgctgttgctttgctggt
aatgatgaatttttgtctggatctgatgacggaagcattgagctgtggagcgtattgcgt
aaaaagccggtctctattgtaaaaaatgctcacactctgtctgcattgaagaagcaagta
gagctaaatagcaacggagttatgtctaatggtcagattgatagtagtgaatttaaagca
agtagcccatgctcaaatgcacagtcctgggtcagctctgtcactgtatgcaggaatagt
gaccttgctgcatccggtgctggagatgggtttgttcgattatggcaaatcaacagtgag
accaaagctgttgcacccttatttgatgttcctttggtggggtatgtgaattccttggct
attgcaaaatctggtagatttcttgttgctggagttgggcaggaaccacgtcttggaagg
tgggatcgtatatctacagctagaaatggtgttgctttgcaatccttcaagcttacatca
tag

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