Chenopodium quinoa (quinoa): 110713840
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Entry
110713840 CDS
T05764
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110713840
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110713840
Spliceosome [BR:
cqi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110713840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
DEXQc_Suv3
ResIII
Helicase_C
IstB_IS21
AAA_22
nSTAND3
PhoH
Motif
Other DBs
NCBI-GeneID:
110713840
NCBI-ProteinID:
XP_021747967
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MNILLQIPSSFSPLSLSSFTLLSPSLIQFPKLGFHSPKLPPNFRFRPLFTSPNPLSSVEN
QLSDADEDDFDDEDDEATDEYDVVSVSSDVAEVSGELEEDDEGDSLETQDEELNASFWSS
NDSKLQRVQKLCNEVREFGADIIDADELASIYDFRIDKFQRLAIKAFLRGSSVVVSAPTS
SGKTLIAEAAAVATVAKGKRLLYTTPLKALSNQKFREFRDAFGESNVGLLTGDSAINKDA
QVLIMTTEILRNMLYQSVGVVSSGSGLFDVDVIVLDEVHYLSDTSRGTVWEETVIYCPKE
VQLICLSATVANPDELAGWIGQIHGKTELITSSKRPVPLTWLFSTKTSLLPLLDEKGTSM
NRKVSVSYLRLYASGENSHNDEGSRRKNSRRRKDDSDLIYEEYGRSSRQSSLSKNDINTI
RRSLVPKVEDTLEHLKGRDMLPAIWFIFSRKGCDAAVQYLEGSKLLDDCEKAEVELALKR
FRIQYPDAVREPAVKGLRRGLAAHHAGCLPLWKSFIEELFQRGLIKVVFATETLAAGINM
PARTAVIASLSKRSEAGRIQLRSNELLQMAGRAGRRGIDEKGHVVLVQSPFEGAEECCEL
LFSSVEPLVSQFTASYGMVLNLLGGAKVTRRSNEVDGIKVSEVGRTLEEARKLVEQSFGN
YLGSNVMLASKEELARIKKEIELLTAEVSDDAFDMKIRKLLSGSAYQEITGLQEELRVEK
QLRVEFRRRMELERMSSFKPLLKELGDGNLPFLCLGYKDADGIEHSIVAVYLAEVQSLDG
SKVKNLVQNDVSFKLNMAEAETSSDASGRLPCFEPSYHVALGSDNSWYLFTEKWIKAVYR
TGFPNMALNEGDSLPRDILTTLLDKEGMEWARFVDSELGNLWHMEGSLETWSWSLNVPML
SSLSEEDKASHMSPTQLEAVECYRKQRNKVSHLKRKITRAEGFREYKKILDMAKLTVGKI
RRLKTREKRLVDRIERIEPSGWKEFLQISNVIHETRALDINTNVIFPLGETASAMRGENE
LWLAMVLRDRVLLDLQPAQLAAVCGSLVCEGIKVRPWKNNSYIYEPSATVINVINHLEEP
RNYLLQLQDKHDVQISCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDL
LAQIPKLPDVDPILQSNAKIASGVMDRSPISELAG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaacatactcctccaaattccttcttccttctctccactttctctctcctccttcact
cttctctctccttctctcatccaattcccaaaattagggtttcattcccccaaattacct
cccaatttccgatttcgccccctttttacatccccaaatcctctctcctccgtcgaaaat
caactttccgacgccgacgaagatgatttcgacgacgaagacgatgaagctaccgatgaa
tacgacgtcgtatccgtttcttccgacgttgcggaggtttccggcgagctggaggaagac
gacgaaggtgacagtcttgagactcaggacgaggagttaaacgcgtcgttttggagtagc
aatgattctaagttgcagagagttcagaagttgtgtaatgaagtcagagagtttggcgct
gatatcattgacgccgatgaactcgcttctatatatgattttcgtattgataaattccag
agactggctattaaagcatttttgagaggttcgtcagttgtagtctcggcaccaacaagt
agtggcaagacgttgatagccgaggcggcggcggtggcgacagtggcaaaaggaaagcgg
ttgttatatactacaccgcttaaagcattgtcaaatcaaaaatttcgggagttcagggat
gcatttggtgagagtaatgttggccttttgacgggagattctgctattaacaaagatgct
caagttttgattatgacaacggaaattttgcgaaatatgttgtatcaaagtgttggagtg
gtttcttctggtagtgggctttttgatgttgatgtaattgttttggatgaagtacattat
ctaagtgatacgtctcgtggtactgtttgggaggagacagtcatctattgcccaaaagaa
gttcagcttatttgtctgtcagcaaccgttgcaaatccagatgagctagctggttggatt
ggacagattcatggcaaaacagaattaataacatcatcaaaacgtcctgtaccattgacg
tggcttttttctacgaagacctctttgcttcctcttcttgatgagaaaggaaccagtatg
aacaggaaagtttcagtcagctatctacgtctatatgcttcaggagagaattctcacaat
gatgagggatctagacgtaagaattccagaagacgtaaagatgacagtgatttgatatat
gaggagtatggtagatcgtctagacagtcatctctgtcaaaaaatgacataaacacgata
cgacgttcacttgttcctaaagttgaagatacattggaacatcttaaaggaagagatatg
ctgcctgcaatatggtttatttttagccgaaaaggttgcgatgctgctgttcaatacctt
gaaggttccaagcttctggacgattgtgagaaggctgaagtggaactggccctgaagcgg
ttccgtattcagtatcctgatgctgtcagagaacctgctgtaaagggcctgcgtcggggt
cttgctgcacatcatgctggctgtcttcccctgtggaaatcattcattgaggagcttttt
cagcggggcctcattaaggttgtttttgccacggaaactcttgctgcagggatcaatatg
cctgcaaggacagctgttattgcttctctcagcaaaaggagtgaagctggacgtatccag
ctaaggtccaatgagttgcttcagatggcaggccgtgctggacgtcgaggtatagatgaa
aagggtcatgtagtacttgttcagagtccctttgaaggtgctgaagaatgctgtgagctt
ctattttctagcgtggagcctcttgtttcacagtttacagcttcatatggaatggttttg
aaccttcttgggggcgcaaaagttacccggcgatcaaatgaagtggatggcatcaaggtt
tctgaagtaggacgaactttggaagaagcaaggaaattagttgagcaaagttttggaaac
taccttgggagtaatgtaatgcttgcttcaaaagaggagcttgcaagaattaagaaagaa
atagagttattaacagcagaagtcagtgatgatgcgtttgatatgaaaatcaggaagttg
ttgtctggatcagcataccaagagattactggtttgcaggaagaattaagggtagaaaaa
caactccgagttgaatttcgacgaaggatggaattggagaggatgtcttcttttaaacct
ttattgaaggagttgggagatggaaacttaccttttctgtgtctaggatacaaggatgcc
gatggtattgagcactcaatcgttgcagtatacctggcagaggttcagtcacttgacggg
tcaaaagtaaagaaccttgtgcagaatgatgtttcgtttaagctgaacatggcagaagca
gagacaagtagtgatgcttctggaaggctgccatgttttgagccatcttatcatgtggct
cttggttcagataattcttggtatcttttcactgaaaagtggatcaaagcagtatacaga
acaggttttccaaacatggctttgaatgaaggtgatagtttaccacgagatattttgacc
acgcttcttgataaggaaggaatggaatgggcaaggtttgttgattctgaattgggaaat
ttatggcatatggaaggatccctggagacgtggtcttggagtttaaatgttcctatgttg
agtagcctgtctgaagaagacaaggcatcacacatgtcaccaactcaacttgaggcggtg
gaatgctatagaaaacaaagaaacaaagtttcgcacttgaagagaaagattacccgtgca
gaaggcttcagagaatacaagaagattttggatatggcaaagttaactgtgggaaagatt
aggcgcctgaagaccagagagaaacgcttggttgatcgaattgagagaattgaaccctcg
ggatggaaagagtttttgcagattagcaatgtgattcatgaaacaagagcattagatatc
aatacaaatgtgatatttcctctaggagaaactgcatctgcgatgcgaggagaaaatgaa
ctttggcttgcaatggttcttcgagacagagtactgttggacctacagccagcacaacta
gctgctgtctgtgggagcctagtttgtgaagggataaaagtccgaccatggaagaataac
agttatatatacgagccttctgccactgtgattaacgttataaaccatttggaggagccg
aggaattatctattgcagcttcaagacaaacatgatgtacagatatcttgctgcttggat
agccaattttctggtatggtagaagcatgggcctctggtctaacttggcgggaaatcatg
atggattgtgcaatggatgagggtgatctggcaagactcttacgacgaacaattgattta
ttagcacaaattcccaagttgcctgatgttgacccaatcttacagagcaacgcaaagata
gcatctggtgtcatggaccgttcaccaattagtgagctagctggataa
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integrated database retrieval system
