Chenopodium quinoa (quinoa): 110714000
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Entry
110714000 CDS
T05764
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110714000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110714000
Spliceosome [BR:
cqi03041
]
Common components
Common spliceosomal components
SR proteins
110714000
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
RRM_3
Nup35_RRM_2
SET_assoc
Nup35_RRM
TSSC4
Motif
Other DBs
NCBI-GeneID:
110714000
NCBI-ProteinID:
XP_021748148
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MRPVFVGNFEYSTRQTDLERLFSKYGRVERVDMKSGFAFVYFDNERDADDAIRALDNVPF
GRDKRRLSVEWAKGERGKARDGSKGGRVTKTLFVINFDPVRTRDRDLERHFEPYGKILSV
RIRRNFAFVQFEIQEDATKALEHTNMSKLLDRVISVEYALRDDDERDDRLRSPRGYGRSP
LQRSPSPHFRRSRPSPDYGRPRSPVYDRYDGPAYERRRSPDYIRYRSRSPVRRSRT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctgttttcgttggaaatttcgagtacagtactcgtcaaactgatcttgagcga
cttttctccaagtatggcagagttgaacgcgttgatatgaaatctgggtttgcttttgtt
tacttcgataatgaacgcgatgcggatgatgccattcgtgctcttgacaatgttccgttc
ggccgtgacaagcgcaggttgtcagtggagtgggccaagggtgaaaggggtaaggcccgt
gatggatccaagggaggaagagtcactaagaccttatttgtcataaactttgatccagta
agaacacgtgatcgggatctagagagacactttgaaccttatgggaagattttgagcgtc
cgaattcggcggaactttgcatttgtgcagtttgaaattcaggaagatgctactaaggct
cttgagcacaccaacatgagcaagctgttggacagggtaatctcagttgaatatgccctc
cgcgatgatgatgagagagatgacaggcttcgcagtccaagaggttatggccggagccct
ctgcagcgctccccaagtccacattttcgtcgcagtaggccaagtcctgactatggtcga
cctcgtagccctgtttatgatcgatatgatggtccagcttatgagaggcgtcgtagtcct
gattatattcggtaccgcagccgttcaccagttcggaggtcaagaacttga
DBGET
integrated database retrieval system
