Chenopodium quinoa (quinoa): 110714061
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Entry
110714061 CDS
T05764
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110714061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110714061
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110714061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
COG3_N
FapA
APG6_N
Motif
Other DBs
NCBI-GeneID:
110714061
NCBI-ProteinID:
XP_021748217
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MAGFTGFSFTNTSSTSSSSSSSPSPFSLSPSPSPFAANPTSSAAPSPSPFSASSTPSFAG
FSASSAAAPSLSFGAASSSSATPSFGFGSSTPAFGVASSATPSSSSSAPSLAFGSSPTPS
FGFGSSAAAPAFSFSPATASTTSSASIPSSLFASAASSSAAPSSFFASASSSSAAPSSLF
GSASSSSAAAPSSLFGSASAAPSSLFGSASSSSAAAPSSLFGSASSSSAATSTGAFSFLK
SPTQTATAAPTATTTAASLSPAFSFTPSASSSAASTNTSSSLFNFNNAAAASASKPLFGA
TATPTTPPSAATAATTTPSSPFAAATTTPAASTQPAAAAATSTAPSAFTGFSLNSSAQPA
AAASTASSAVTGFSLNSSTVATPAASAAASPAATAFTGFGVSSGSSSLSNATASFPSFTI
PATKATTPALSSQSQPQQTASTITTSTAAASTATGFLATSSVSAAISSSTTTAVQTSSVV
AVASSSGTTSAVSTPVTSAPIPKLPSEITGKTVEEIIKEWNSDLQDRTRKFQKQANAVAD
WDKRILQNRDVLLRLETEVAKVVETQSNLERQLELIETHQQEVDKALESIEEEAERIYKD
ERNLLLDGEAASTRDAMYDQAESVERELEHMTEQIKSIIQSLNASQGGELDTTEGMSPLD
VVVRILNNQLSSLMWIDEKAEEFSFRIQNLASEGSAADRELVAPRLWG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgggattcactggtttctccttcaccaacacttcttcaacctcttcctcttcttct
tcctctccttccccattttctctctccccttccccctctcccttcgccgctaaccctacc
tcatcagccgccccctccccttcccccttcagcgcctcttccaccccctccttcgccgga
ttctccgcctcctccgccgccgccccatcactcagtttcggcgccgcttcttcctcctcc
gctaccccttcattcgggttcggatcctccactcccgcatttggggttgcttcctctgct
acaccttcctcctcctcctccgccccatcactcgctttcgggtcttcccccactccttca
ttcgggttcggatcctccgctgcggctcccgccttctctttctctcctgccaccgcttca
accacctcctccgcttcaataccatcgtccttgtttgcgtctgctgcttcttcttcggct
gcaccgtcgtctttctttgcgtctgcttcttcctcttctgctgcaccatcttccctattt
gggtcagcttcttcttcctctgctgctgcgccatcttctctatttgggtcagcttctgct
gcaccatcttctctatttgggtcggcttcttcttcatctgctgctgcaccatcttctcta
tttgggtctgcttcttcttcatcagctgctacttctacaggtgcattttcattcttgaaa
tcgcctactcaaacagcaacagcagcaccaaccgcaaccacaactgctgcatcgctttct
ccagcgttttcctttacgccatcggcttcttcttctgctgctagtaccaatacatcatcg
tcattgttcaatttcaacaatgccgccgccgcctcggcttcgaagccgctctttggtgct
actgccacccctactactcctccatctgctgccactgctgctactacaacaccttcttct
ccctttgctgctgcaactacaacacctgctgcatcaactcaacctgctgctgctgctgct
acatcaactgccccatctgcattcactgggttttcactgaattcatcagctcaacctgct
gctgctgcatcaactgcttcatctgcagtcactgggttttcactgaattcatcaactgtg
gcgacaccagcagcttcggctgcggcttctccagcagcaactgcgtttactggttttggg
gtctcatccgggtcttcttccttgagcaatgctactgcttcgtttccgagttttactatt
cctgcaactaaggctactaccccagctttgtcttctcaatctcagcctcagcaaactgct
tctactattactaccagtactgctgctgctagcactgctactggcttcctggctacatct
tctgtctcagcggccatctccagctctacaacaactgctgtacaaacatcttctgttgtt
gctgtagcctcaagtagtggaactacctctgccgtgagtacccctgtaacatctgctccc
atccccaagttgccgtctgagatcactggaaaaactgttgaagagatcatcaaggagtgg
aactctgatttacaagaccgtactagaaaattccagaagcaggctaatgcagttgctgat
tgggacaaaagaatcttgcaaaaccgagatgtacttctacgacttgagaccgaagtagca
aaagtggttgagacccaatccaatttggaaagacagctggagttaatcgagactcatcaa
caagaggttgataaagctttggaaagtattgaagaagaagccgagcgtatctacaaggat
gaacgaaatttgcttctagatggtgaagctgcatccaccagagatgcaatgtatgatcag
gcagaatctgttgaaagggagctagaacacatgacagagcaaattaaatcaattattcag
tccctgaatgctagtcagggtggagaacttgatacaactgaaggaatgagtccattagac
gtggtggtgaggatcttgaataatcaattgagttctctgatgtggattgatgaaaaggca
gaagagttttcatttcgcatccagaatcttgcaagtgaaggttcagctgctgaccgtgag
ctagtggccccaagattgtggggttaa
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