Chenopodium quinoa (quinoa): 110714066
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Entry
110714066 CDS
T05764
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110714066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqi03400
]
110714066
DNA repair and recombination proteins [BR:
cqi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110714066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
INTS1_INTS2-bd
Motif
Other DBs
NCBI-GeneID:
110714066
NCBI-ProteinID:
XP_021748222
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MARNKESLVLLLDVGPKMHGVLPQVEKVCAMLLEKKLIYNKYDEVGIVLFGTAETNNELT
KEVGGYENIVVLRSIKVVDGDLVDVLDQIPRGTVPGDFLDAIIVGMDMLIKKYGPTNKGK
KRLCLITNALSRLRDPYEGTKEDQVSTIAQQMTEQAIKLECVVVRGKLSGDADKNVMDEN
DKLLELFTKKTWAKTLYVESATSLLGALRTRSIAPVTIFRGDLEVSSALKIKVWVYKKTS
EEKFPTLKKYSDKAPATDKFATHEIKVDFEYRSINDPETVVPPEQRIKGYRYGPEVVPVS
SDAWEAVKFKPEKSVKLLGFTDAKNILRHYYMKDVNIFIAEPGKREAVTAISALARAMKE
LNKVAIVRCVWRQGQSGVVIGVLTPNVSVKDSVPDSLYFNVLPFMEDVREFQFPSFKNLP
TFQPTEEQQAAADNLVMMLDLAPPAKEENLKPDLTPNPVLERFYHFLELKAKDPDAAVPP
LDEALKKISEPDAELLSQNKSVIDEFRRCFELKENSTKKKSTRSVKEKPSGSDDEKEAAE
DHNVGKTLMTTDDNTAVKAEISDEKPSSAVANNSSLIVEKIENITPVQDFEAMLSRRDSS
DWITKAIKGMRSKILELLEDSFKGSNYDKAVECLVALRKGCVLEQEPKQFNDYLQYLCRF
CKDHGLNDFYELLDLKGMTLITKSEAVDSDVADEAARSFLVTKEPKVE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggaatcactggtcctattgcttgatgttggtccaaaaatgcatggt
gttcttccacaagttgagaaagtttgtgccatgcttttggagaagaagctgatttataac
aaatatgatgaagtgggaattgtcttatttggaactgcagaaacaaacaatgagctcact
aaagaagttggcggatatgaaaacattgtggttctgaggagtataaaagttgtagatgga
gatctggttgatgtactggatcagattccacgaggaacggttcctggcgattttcttgat
gcaattattgttggtatggatatgctaataaagaagtatggaccaactaacaagggaaag
aaacgcctttgcctaatcactaatgcactctctcgtctgagagatccatatgaaggcaca
aaagaagatcaagtcagcactattgctcagcaaatgactgagcaggctattaaattggaa
tgtgtagtagttagagggaagctaagtggtgatgctgataagaacgttatggatgagaat
gacaaactattagaacttttcacaaagaaaacttgggcaaagactctttatgttgaaagt
gcaacttcgttgttaggagcactcaggactcggagcatagcccctgttacaatattcagg
ggtgatcttgaagtgagctctgcactgaagattaaggtctgggtatacaagaaaacttcc
gaagaaaaatttcctaccctaaagaagtattcagataaagcacctgcgactgataaattt
gccacccatgaaatcaaggtggactttgaatatagaagcattaacgaccctgaaacagtt
gtgcctccagagcaaaggatcaagggttatcgttatggaccagaagtggttcctgtatca
tctgatgcatgggaagctgtcaaattcaaaccagagaagagtgtgaagctcttaggattc
actgatgctaaaaacatactacgccattattacatgaaagatgtcaacatattcattgct
gaacctggcaagagagaagctgttactgcaatttctgcattagctagagcgatgaaggaa
ttgaacaaggttgccatagttcgctgtgtttggaggcaaggacagtcaggtgttgtgatt
ggagtcttgacaccaaatgtatctgtgaaggacagtgttcctgattcattgtacttcaat
gtactcccgtttatggaggatgttcgcgagttccagtttccttctttcaaaaacctccca
acatttcagccaaccgaagaacagcaagcggctgctgataatctagtaatgatgcttgac
cttgcaccacctgccaaagaggagaacttaaagccggacctcacaccaaatcctgttctc
gagcggttttatcactttcttgaactaaaagcaaaagacccagatgctgctgtgcctcca
cttgatgaagccttgaaaaaaataagtgagcctgatgcagaattactatctcaaaacaag
tctgtcattgatgaatttcgaagatgctttgaattaaaggagaactctacgaagaagaaa
tcaactaggtcagtcaaagagaagccatctggatcagatgatgagaaagaggctgcagaa
gaccataatgtggggaaaacattaatgaccaccgatgataatactgcagttaaggctgag
atcagtgatgagaaaccatccagtgctgtggcaaataattcttctctcattgttgagaag
attgagaacatcaccccagtccaggattttgaagctatgttatctcgtagagatagctca
gattggataactaaagcaatcaaaggtatgcgaagcaaaattcttgaacttttagaggac
tcatttaaaggaagtaactacgacaaagccgtagagtgtctcgttgccctccgaaaaggc
tgtgtccttgaacaggaaccgaaacaattcaacgactatctacagtatctttgtagattc
tgcaaggatcatggcctgaatgatttttatgagctccttgacttaaaagggatgacatta
atcacaaaatcagaagccgtagacagtgatgtggcagatgaagcagcacgaagttttctg
gttaccaaagagcccaaagtcgaataa
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