KEGG   Chenopodium quinoa (quinoa): 110714472
Entry
110714472         CDS       T05764                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110714472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqi03041]
    110714472
   03036 Chromosome and associated proteins [BR:cqi03036]
    110714472
Spliceosome [BR:cqi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110714472
 Complex B
    110714472
 Complex C
   U2 SnRNP specific factors
    110714472
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110714472
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N UME TAF4
Other DBs
NCBI-GeneID: 110714472
NCBI-ProteinID: XP_021748677
LinkDB
Position
Unknown
AA seq 1273 aa
MASIDPEIAKTQEERKKMEQELASLSSLTYDTDLYGSSGREDYVQSIPVDDDEDNTDAMD
NEVARKLASYTAPKSLLKEMPGAGADYDDGLRKPQRIIDREDDYRRRRLDRVISPARHDA
FAMGDKTPDVGVRTYADVMREEALRRDKEETLRLIAKKKKEEEEQKKSLEEEKGAAAAQA
QPSQKRRNRWDQSQDQQGDEGVAKKAKSSSDWDLADSTPGIGRWDATPTPGRLGDATPSA
RKNRWDETPTPGRAQDSDATPSAGGLTPGATPAGSTWDATPKITGMATPTPKRQRSRWDE
TPATMGSATPMAGATPAAMTPGVTPVGGVDMATPTPGQINLRGPVTPEQYNLMKWEKDIE
ERNRPLTDEELDSMFPPEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYQIPVEDRNQ
QFDVGKEPANGLPFMKPEDYQYFQALLNDENEEELSPEEQKERKIMKLLLKVKNGTPPQR
KTALRQLTDKAREFGAGPLFNQILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVH
KILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAF
SVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEH
GLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGF
IIPLMDALYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILP
EFFKNFWVRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETI
EKVVTNLGASDIESRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQ
ICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLG
SILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVP
AREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVC
TTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTP
LLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVT
EAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPTLENEG
ENIYSRPELLMFV
NT seq 3822 nt   +upstreamnt  +downstreamnt
atggcgtcgatagacccagaaatagcgaaaactcaggaagagaggaagaagatggagcag
gaattagcctctctttcatctcttacatatgatactgatctttatgggagcagtgggagg
gaggattatgtccagtcaattcctgttgatgatgatgaggataatacggatgctatggat
aatgaggtggctcgtaagttggcttcttatacggccccaaagtctcttttgaaggaaatg
cctggtgctggggctgattatgatgatgggttgaggaagccgcaaaggattattgatcgt
gaggatgattataggaggaggaggcttgatcgggttatttctcctgccaggcatgatgct
tttgcgatgggggataagaccccggatgttggtgtcaggacttatgctgatgtgatgagg
gaggaggcgttgaggagagacaaggaggagacgttgcgattgattgctaaaaagaagaaa
gaagaggaggagcagaagaagagtttggaagaggagaaaggagctgctgctgctcaagct
cagccttctcagaagaggagaaataggtgggatcagtctcaggatcagcaaggggatgag
ggtgtagcaaagaaggccaagtcttcctctgattgggatttagctgattcaaccccggga
attggaaggtgggatgccactcccacacctgggagactcggtgatgctacaccatctgct
cggaagaataggtgggatgagacaccaacacctggccgtgcacaagattctgatgctact
ccatctgctggtgggctcactcctggtgccactcctgctggatcaacgtgggatgccact
ccaaaaatcactggtatggcaacaccgacaccaaaacgtcagagatcaaggtgggatgaa
actccagctaccatggggagtgcaacacccatggctggggcaactcctgcggctatgacc
cctggtgtgacacctgttggtggggttgatatggctacacctactcctgggcagattaat
ctgcgtggccccgtaactcctgaacagtataacttgatgaagtgggagaaggatattgaa
gagaggaacagacccttgactgatgaagagcttgattccatgttcccacctgaaggatat
aagatcttggatcctcctgcttcatatgtgccaattaggaccccagcaaggaagcttctt
gccacacccactccaatggggactccactttatcaaataccagttgaagacaggaatcag
cagtttgatgttggaaaggagcctgctaatgggttgccatttatgaaaccagaggactat
caatattttcaggcgttgttgaatgatgaaaacgaggaagagctgtcaccagaggagcag
aaggaaagaaagattatgaagttgctacttaaagtgaaaaatggtactcctcctcagagg
aagactgcgttgcggcaactcactgacaaagcaagagaatttggtgctggtccgttgttt
aaccaaattttgcctttgcttatgcagccgacattggaagaccaagaacgacatcttctt
gtgaaagttattgacagggtgctgtacaagcttgatgagttggttcgacctttcgtgcac
aaaattcttgtggttattgagccactcttaattgatgaagactactatgcccgtgttgag
gggagggaaattatttcaaacttgagtaaggctgctggattggccactatgattgctgca
atgagaccggatattgataacattgatgagtatgtcaggaatacaaccgcgagggctttt
agtgttgtggcttcagctctaggtatacctgctctgctgccatttttaaaggctgtctgt
caaagtaagaagtcatggcaagctaggcatacaggtattaagattgtccaacagatagcc
attttgattggttgtgctgtgctgccacacttaagatctttggtggagatcatagaacat
ggtcttaatgatgagaaccagaaggtcagaacaattactgcactttctctggcagctcta
gctgaggcttcagccccgtatggtattgagagttttgactctgtattgaaaccgctgtgg
aaaggtatcagatcacaccgtggaaaggtcttggctgcattcttgaaggccattggtttt
atcattccgttgatggatgctctttatgctagctactatacaaaagaagttatgtttatt
cttattcgggagttccagtcaccagatgaagaaatgaagaagattgttctgaaagtggtt
aagcagtgtgttagcactgagggtgtagaggctgactacattagaagtgatatccttcct
gagttctttaagaacttttgggttaggagaatggctcttgacagaagaaactacaagcag
cttgtggaaactacggtagagatagccaacaaggttggcgttgctgatatagttggtagg
atagtggaggatcttaaagatgagagtgaaccctataggcgtatggtcatggagacaata
gagaaagtggtgacaaacttgggggcatctgatattgaatctcgtttggaggagcttctg
attgatggtattctgtacgcctttcaagagcagacaagtgatgatgccaatgtcatgctt
aatggttttggcgctgtggtcaatgccctcggccaaagggtcaaaccttatctcccccag
atatgtggtacaattaagtggcgtttgaataacaagagtgcaaaagtaagacagcaggct
gctgatcttatctctcgaattgcagtggtcatgaaacagtgtggagaggaacagcttatg
ggtcacttgggtgtggttttgtacgagtatctaggagaggagtatccagaagtgctgggt
tcaatcttgggagcactgaaagcaattgttaacgtcattggtatgaccaagatgactcca
ccaatcaaagacctgctacctaggctgactccaattttgaagaacaggcatgagaaagta
caggagaattgtattgatcttgtgggacgtattgcagatcgtggagcagagtttgttcct
gcaagagagtggatgaggatatgctttgagcttctggagatgctcaaggctcacaagaaa
ggaattcgaagagccactgtcaacacctttgggtacattgccaaagccattggacctcag
gatgtcttggctactctgcttaacaaccttaaggtgcaagaacgtcagaaccgtgtttgt
acaaccgtggctattgcaattgttgctgagacttgctcacctttcactgttttgcctgct
cttatgaatgaataccgtgttcctgagcttaacgtgcagaatggtgtccttaaatctctg
tctttcctctttgaatatattggtgaaatgggaaaggattatatctatgccgtgactcct
ctcctcgaagatgctcttatggaccgggacctggttcatcgtcagactgcagcttctgcc
gtgaaacatatggctcttggtgttgcaggtttaggctgtgaagatgctttggtgcacctg
atgaactacgtgtggcccaatatcttcgagacttcacctcacgtaatcaacgctgtcaca
gaagccattgagggaatgagagttgcattgggtgccgctgcaatactgaattactgtctg
cagggtttgttccacccagcaaggaaagttagggaagtctactggaagatatataattct
ctgtatattggagctcaggatgctcttgttgctgcttacccgactttggaaaatgaagga
gaaaacatctatagtagacctgagttgttgatgtttgtgtaa

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