Chenopodium quinoa (quinoa): 110714474
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Entry
110714474 CDS
T05764
Name
(RefSeq) ATP-dependent helicase BRM-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110714474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqi03021
]
110714474
03036 Chromosome and associated proteins [BR:
cqi03036
]
110714474
Transcription machinery [BR:
cqi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110714474
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110714474
Chromatin remodeling factors
BAF complex
110714474
PBAF complex
110714474
GBAF(ncBAF) complex
110714474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
QLQ
ResIII
DEAD
Bromodomain
AAA_14
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110714474
NCBI-ProteinID:
XP_021748679
LinkDB
All DBs
Position
Unknown
AA seq
2248 aa
AA seq
DB search
MQSGGGSQHAGAGGHGRSPASAAASPSSSSSAASQQQQQQQQQQQQQQHFDSIQQQQQQQ
QHRQSLQQQLLRKPEGNEAILAFQAAGLQGVMGGANFMGSPSSLQFSQQQRKYIDMAQQH
GSPHLREEGQNKNPAHEQQGLNPVHQAYMQYAMQAAKQKSVMGMQPQGQANMGIGSPSSS
KDQDMRMANMRMQELASMQATNQAQAAASKKSSEPFGRVEKQIEQGQQGGSDQRNEPKPP
MMQTTMGHPTSANMMRPVQNPQAQAGIQNMGNNQMAVAAQLQAWARERNIDLSQPANANL
VAQLMPLMQSRMISQQKTNESNSQPSPVPMQRQQVTSPPATSESSPRANSSSEVSGQSGA
SRARQTVPPGPFGSASNAGIGNSTNNLPAQFSVHSRDNQAPSMQSTMVGNGMASVQASRP
STNLNQGSEHSMNVKNAGNGQEALQMQYPRQLNQPSPRPTSAPNDGGSGNNLPLPAQPPS
QISQQQSGFTKQQLHVLKAQILAFRRLKKGESTLPQELLRAISAPPLESQPLQSVVPAGS
INQDKSTVRNADESPKHADSGEKAPQAPPPAVAKNSLKEEISTIDEKATISTNMAGATSV
TRETSSVLSPEKEDLQAAPVVIKAEQDVERNIQKTPIRNDVGTDRGKAIVPVSVGESAQA
KKPLQTTSLSQPKDVGSSRKYHGPLFDFPCFTRKQDSLGSAVMGNNNLSLAYDIKDLLSG
EGMEVINNKRAENLRKIGELLAVNLERKRIRPDLVVRLQIEEKKLKLLNLQARVRDQVDH
EQQEIMAMTDREYRKFVRICERQRLELSRQVQASQKAMREKQLKAIFQWRKKLLEAHWAI
RDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSISGDA
AERYNVLSTFLTQTEEYLHKLGSKITATKSQQEVQEAAAVAAAAARSQGLSEEEVRAAAA
CAGEEVMIRNQFSEMNAPKDSSSVNKYYSLAHAINERVVRQPSMLRAGTLRDYQLVGLQW
MLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHT
WLPSVSCIYYVGAKDQRAKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEA
QRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFS
QPFQKEGPTHNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPAKVSFVLKCK
MSAIQSSIYDWVKTTGTLRVDPEDEKFKVQKSPYYQARAYRTLNNRCMELRKLCNHPLLS
YPFFNDFSKDFLVKSCGKLWILDRILIKLHRTGHRVLLFSTMTKLLDILEEYLQWRRLLY
RRIDGTTSLEDRESAIVDFNDPQTECFIFLLSIRAAGRGLNLQTADTVIIYDPDPNPKNE
EQAVARAHRIGQKREVKVIYMEAVVDKIPSHIKEDEFRTGGMVDLEDDLVGKDRYVGSIE
SLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEV
NRLIARSEEEVEFFDQMDEELDWIEEMTRYDQVPEWLRASTKEVNSAISALSKKPSKDIF
SGNAGVEPGETDKRRGRYKGKKVPVYTELDDDIGDSSDASSEDRNEYSAPEEDGEVGEYE
DEEDAAAADNKDQSEEDVPVNDGFDYPRASESTRAGHMVDEPGSPGSSSDSRRMTRAVSP
SVSSQKFATLSAIDARPSSGSKKLLDELEEGEIVVSGDSHLDIQQSGSWNHEREEGEDEQ
VVQPKIKRKRSIRLRPRHTIDRPEERYSEKMSLQRGDPSQSQCLPDQKFGSQLRIDPESK
MFGDSSALKQDQCDMSSKTRRSLPSRRTGSSSKLHASTKSGRLNSLSNPTEEAFENSKDS
FDGIKDVNTSGNSSFGAKMSDIIQRRCKNVIGRVQRRIDKEGHVVPLLIDLWKKTESSGY
TNGPGNKLLDLCKIDHRIDRLQYSGVMEVVNDVQLMLKSAVQYYGFSHEVRCEARKVHDL
FFDILKGSFPDVDFQEAKSTVSFSGPPSTAASVALRSTSASQGSNRKHRLMNDVERGDVN
PSPRQSLRGPPIIANEDSRTTRSNLPVKESRLGSNSSRDQDDSPLLTHPGDLVVCKKKRK
DREKPAAVNTRSGSTGPVSPPSMGRSSIRSPGSVSTPRDSRAGGQQQMWSNQSVQQVNGS
GSSGGTIGWANPVKRLRTDAGKRRPSIM
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggcggtgggtcccagcacgccggtgccggcgggcatggacggagtccggcg
tctgccgccgcatcgccatcgtcgtcgtcatcggcggcttcgcagcaacagcaacaacag
cagcagcagcaacaacaacaacagcattttgattcaattcagcagcagcaacaacagcaa
cagcacagacagtcactacaacaacaactgctacgaaaacctgaaggaaatgaagccatc
ctagctttccaagctgctggtttgcagggtgttatgggtggggctaatttcatgggatct
ccgagctcattgcaattttcacagcagcaaagaaaatacattgatatggctcagcaacat
ggatctcctcatttacgtgaagaaggtcaaaataagaatcctgctcatgagcaacaaggt
ttaaatccagtccatcaagcatatatgcaatatgctatgcaggctgcaaagcaaaaatct
gttatgggcatgcaacctcaagggcaagccaatatgggaataggaagcccttcatcttca
aaagaccaggacatgcgtatggcaaatatgagaatgcaggagcttgcttcaatgcaggca
actaaccaggcccaggcagctgcatcaaagaagtcatctgagccttttggtcgtgtcgag
aagcagatagaacaaggtcagcaggggggctctgatcagaggaatgagccaaagccccct
atgatgcagactactatggggcatcctacttctgctaatatgatgaggcctgtacaaaat
ccacaggctcaggcagggattcaaaacatgggaaataatcaaatggctgttgcggctcag
ttacaggcatgggcacgggaacgcaatattgatttgtcacaacctgcaaatgccaatttg
gtggcgcagctgatgccattaatgcagtctaggatgatttctcagcaaaagacaaatgaa
agtaattcacagccttctcctgtccctatgcaaaggcagcaggttacttccccacctgct
actagtgaaagttcgccccgtgcaaactcttcaagtgaggtttctgggcagtcaggtgct
tctagagccaggcaaacagttccacctggtccatttggttcagcttcaaatgctggtata
ggtaacagtactaacaatttgcctgcacagttctctgtacacagtagagataaccaggca
ccttcaatgcaatcaacaatggtgggaaatggaatggcttctgtccaggcatcccgccct
tctacgaacttgaaccaaggttcagaacattctatgaatgttaagaatgcaggaaatggt
caggaagcattgcaaatgcagtatcccagacagttgaaccagccatcacctagaccaaca
agtgcacctaatgatggaggatcaggaaataatcttcctctcccagctcagccgccatcc
cagatctcgcagcagcaatctggattcactaaacagcaacttcatgttctcaaggcgcaa
atacttgcctttagacgcctgaagaaaggggaaagcactcttccccaagaattgcttcga
gctatttctgcccctcctcttgaatcacaaccactgcagtctgttgtccctgctggttct
attaatcaggataagtctactgttagaaatgctgatgaaagtccaaagcatgcggactct
ggtgagaaggctccccaagctcccccgcctgctgttgcaaaaaattccctcaaagaggag
atttctacgattgatgaaaaggcaacaatctcaactaatatggcaggtgcaacatctgta
actagagagacttcttcagtattatctcctgagaaggaggatctgcaagctgctcctgtt
gttattaaagctgaacaagatgttgaacgcaatatacaaaaaactcctataagaaatgat
gttggtacggataggggtaaggctattgtgccagtatctgttggtgaaagtgcacaggct
aagaaacccctgcaaacaacttcattgtcccagccaaaagatgtcggctcaagtagaaag
tatcatggtcctttatttgattttccctgttttactagaaagcaagattctcttgggtct
gcagttatgggtaataacaacttgtctttggcgtacgatatcaaagatcttctttctggg
gaaggtatggaagtaattaataataaaagggcagagaatttgaggaagattggtgagtta
ctagcagtcaacttagagaggaagaggatcaggccagatcttgttgtgcgactgcagatt
gaagaaaagaagcttaaacttttgaaccttcaagcacgtgtaagggaccaagtagatcat
gagcagcaggagattatggcaatgactgatagggaatataggaagtttgtccgtatttgc
gagcgacaacggttggagctctcaaggcaagttcaagcatcacagaaagctatgagagaa
aagcagctcaaagctatttttcaatggcgcaagaagcttcttgaggcacattgggccatc
cgtgatgcccggacagctcgcaaccgaggtgttgcaaaatatcatgagaggatgcttaga
gagttctcaaagagaaaggatgatgatagaaataaaaggatggaggcattgaagaataat
gatgtggaaaggtatcgggaaatgcttctagagcagcagactagcatctcaggtgatgct
gcagagagatataatgttctttcgacatttttgacccaaactgaagaatatcttcacaaa
ttggggagcaaaataactgccacaaaaagtcagcaagaggttcaagaggctgctgctgtt
gctgcagctgctgctcgatctcagggcttatcagaagaagaagttagagctgctgccgct
tgtgctggtgaggaagtcatgatccgaaatcaattttccgaaatgaatgctcctaaggat
agttcatcagtgaacaagtattacagtcttgctcatgctataaatgagagggttgtgaga
cagccttccatgctgagagctgggactctgcgagattatcagctagttggtctacagtgg
atgctttctttgtataacaacaagttgaatggaattttggcagatgaaatgggtcttgga
aaaactgtacaggtgatggcattgattgcttacttgatggaattcaaagggaattacgga
ccccatctaatcatagttccgaatgctgttttggtgaattggaagagtgagttgcatacc
tggctgccgtctgtatcctgcatatactatgttggtgcgaaggaccaaagagccaaatta
ttttctcaagaagtttgtgccatgaaatttaatgttcttgtcacaacctatgagttcatt
atgtatgatcgttcaaagctctctaaaattgattggaagtatatcgtgatagatgaagca
cagagaatgaaggaccgagaatcagttctagcacgtgacttagacagatatcgttgccag
aggcgtcttcttttgacagggacccctttgcagaatgatttgaaggaactgtggtctctc
ttaaatttacttctacctgaagtatttgacaatcgcaaagcattccatgactggttttct
caaccattccaaaaagaaggtcctacccataatgctgaggatgattggcttgagacagaa
aagaaggtcatcattatccatcgacttcaccagatcttggagccatttatgctcagacgc
cgtgttgaagatgtagaaggctcccttcctgctaaggtgtcatttgttttaaaatgtaag
atgtctgctatccagagttctatatatgattgggttaaaactaccgggactcttcgtgtg
gatcctgaggatgagaagtttaaggtccaaaaaagtccgtattaccaggctagagcttac
agaactttaaataataggtgtatggagctccggaaactttgtaatcatccattgcttagc
tacccattttttaatgacttttcaaaagattttcttgtgaagtcatgtgggaaattatgg
atcttggacagaattcttattaaacttcacagaactggacaccgggtgcttctttttagt
accatgaccaagcttcttgatatcttggaggaatatttacagtggaggcgactcttgtat
aggcgaattgatggaactactagcttggaagaccgggaatctgcaatcgtggactttaat
gatccgcagactgagtgctttatctttttgctgagtatccgtgctgctggacgaggttta
aatttacaaactgctgatacagtcattatttatgatcctgatccgaaccccaaaaacgag
gaacaggcagttgccagagctcatcgcattggacaaaaaagggaagtcaaagtcatctac
atggaagcagttgttgataaaatacctagccatataaaggaggatgagttcagaactgga
gggatggtagacttagaagatgatcttgtgggaaaggatcgatatgtgggttcgattgag
agcctaataagaaataatattcaacaatataagattgacatggctgatgaagtaatcaat
gctggacgttttgatcaaagaacaactcacgaggagagacgaatgacattagaaacgcta
ttgcatgatgaagagaggtatcaagagactgttcatgacgttccctctctgcaagaggta
aaccgattgattgcaaggagtgaagaagaagttgagttctttgatcagatggatgaagaa
cttgattggattgaggagatgacgaggtatgatcaggtacctgagtggcttcgtgccagt
accaaggaagttaattcagccatttcagctttgtccaagaagccatcaaaggacatattt
agcggcaatgcgggagtggaaccaggtgaaactgataaaagaagagggcgatataagggg
aagaaagttcctgtgtacactgagttggatgatgacattggagactcctctgacgctagt
tctgaagacagaaatgaatattctgctcctgaagaggatggtgaagttggagaatatgaa
gatgaggaggatgctgctgctgcagacaataaagaccagtcagaggaggacgttcctgtt
aatgatgggtttgattatcctcgagctagtgaaagtaccagagctggccatatggtagat
gaacctggatcccctggatcatcatctgacagtcgtaggatgacacgggcagtctcaccc
tctgtatcttctcagaaattcgcaactctatcagctatagatgccaggcctagttctggc
tccaaaaaactgcttgatgagctcgaggagggggagattgttgtttccggagattcacat
ttggatatacagcagtcaggtagctggaatcatgagcgtgaagaaggagaagatgaacag
gtggttcagcccaaaatcaaaagaaagcgtagcataagacttcggccaaggcatactatt
gatagaccagaagagaggtacagtgaaaagatgtctcttcaacgtggagatccatcacaa
tctcaatgtttaccagatcaaaagtttggaagtcaattgaggattgatccagagtccaaa
atgtttggagattcttctgctttgaagcaagatcagtgtgatatgtcttcaaaaactcgt
aggagcttaccttcaaggagaaccggaagttcatcaaagctgcatgcctctactaaatct
ggtagattaaatagcttgtctaatcccactgaagaagcattcgagaattccaaggacagt
tttgatggtatcaaagatgtgaacacatccggaaattcaagctttggtgctaagatgtcc
gacatcattcagagaaggtgcaagaatgtgatcggcagggtccagaggaggatagacaag
gaaggccatgttgtacctctcctgatagatttgtggaagaaaactgaaagttcgggctat
acaaatggaccaggaaacaaactattggatttatgtaaaatagaccatcgaattgacaga
ctacagtatagtggagtgatggaagttgttaatgatgtgcaattgatgttgaaaagtgca
gtgcagtattatggtttttcacatgaggtgagatgtgaagcaaggaaagttcatgattta
tttttcgacatattgaagggttctttcccagatgttgatttccaggaggccaaaagtact
gtgtctttctctggtcctccatcaactgcagcttctgttgccttgagatccacatctgca
tcacaaggtagtaataggaagcatagattgatgaatgatgttgaacgaggtgatgtgaac
ccatcgccaaggcagtcattgcgaggtccacctataatagctaacgaagactcaaggacg
acgagatccaatttgcctgtaaaagaatcgaggctcggcagcaatagcagtcgagaccaa
gatgactctcccctgctgactcacccaggagacttggttgtttgcaagaaaaagaggaag
gacagggaaaagcctgcggctgtgaatacaagatctgggtccacagggcctgtctctcct
ccaagcatgggacgaagtagtataaggagccctggctcagtgtcaaccccaagggatagt
cgagcaggggggcagcagcagatgtggtccaatcagtcggtccaacaggttaatggcagc
ggtagtagtggtggaacgattggatgggccaaccctgtaaagagattgaggacagatgca
ggaaagaggagaccgagcattatgtga
DBGET
integrated database retrieval system