Chenopodium quinoa (quinoa): 110714647
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Entry
110714647 CDS
T05764
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110714647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110714647
Spliceosome [BR:
cqi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110714647
Complex C
U5 SnRNP specific factors
110714647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
TPR_16
TPR_17
TPR_2
TPR_8
ubiquitin
TPR_1
Motif
Other DBs
NCBI-GeneID:
110714647
NCBI-ProteinID:
XP_021748892
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MVYLNTFDNKTLVLHVNPNSTTLGNLHQIIFDRLGLPIERQCLLSSSKRLIGDFDCLIAD
LGIQLNSTLSLYIPFCGGMQAPVQSKSNLDFMYLKPPSNYVAGLGRGATGFTTRSDIGPS
RPVMDMPDRSAAPIGSSGAGAGAGEGKGADEEGDEEEGEDKGYDENQNFDEFEGNDVGLF
ASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLKRKL
HTVTVEEWDNLPEIGDYSMRNKKKRFESFVPVPDTLLEKARQEKEHVTALDPKSRGVGGT
ETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGQTVVDPKGYLTDLKSMKLTSDAEI
SDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIKEARLLIEKGCEECPKNEDVWLE
ACRLANPDDAKAVMARGVKMIPTSVKLWLQAAKLEQDHVQKSRVLRKGLEHIASSVRLWK
AVIELADEEQASILLYRAVESCPLQVEFWLALARLETYDTAKKVLNRARLYLPKESAIWI
TAAKLEEANGNITMVEKIIDRGIRALQREGVVINREAWMKEAEAAERAGSVVTCQAIIKH
TVGVGVEEEDRKRTWVADAEECKKRGSVETARAIYAHAISVFLTKKSIWLKAAQLEKSHG
TKDSLDALLRRAVTYVPQAEVLWLMGAKEKWIAGDVPAARAILQEAYAAIPNSEEIWLAA
FKLEFENHEPERAKILLAKARERGGSERVWMKSAIAERELGNVAEEKRLLDEGLQRFPSF
FKLWLMLGQLHERCGELEKAKEAYVSGHKNCPQCIPLWLSLAKLEEKMTGLSKARAILTM
ARKRNPHSPDLWLAAVRAELRHGNKKEADNLLAKALQECPNSGILWATQIEIAPRPQRKA
KSSDALTKCDQDPHVTAAVAKLFWHDRKVDKARSWLNRAVTLAPDVGDFWALYYKFELQH
GTEDLQKDVLKRCVAAEPKHGEKWQSISKAIENAHQPTEAILKKLVIALGKEEKAAGNKQ
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggtttatctcaatacttttgacaataaaaccctagttcttcatgtaaaccctaattca
actactttagggaatcttcaccagattatttttgatagattaggcctcccaattgaacga
caatgtttgttatcatcatccaaaagattaattggggattttgattgtttaattgctgat
ttgggtattcaattgaattcaactttatccctgtatatccctttttgcggaggtatgcaa
gctcctgtgcaatcaaagagtaatcttgattttatgtatttgaaaccaccatcaaattat
gttgctgggttgggtcgtggagctaccgggtttacgacccggtctgatattgggccgtct
agaccggttatggatatgcctgaccgctctgctgctccgattgggagttccggggccggg
gcaggggcaggggaggggaagggagctgatgaggagggtgatgaggaggaaggggaggat
aaagggtatgatgagaatcagaattttgatgaatttgaggggaatgatgttggtttgttt
gcctcggctgagtacgatgaggacgataaggaggcggatgcggtctgggaggctattgat
aagaggatggattcaaggaggaaggataggagggaggctagattgaaggaagagattgag
aagtatcgggcttctaatcctaagattactgagcagtttgctgatttgaagaggaagttg
catactgtgacggtggaggagtgggacaatcttcctgagattggggattattcaatgagg
aataagaagaagaggtttgagagttttgtgcctgtgcctgatacacttcttgagaaggct
aggcaggagaaagagcatgttacggcccttgatccaaagagtaggggcgttggtggaaca
gagacaccttgggcacagacccctgttacggatttgactgccgttggtgagggtaggggt
acggtgttatcactgaagcttgacaggttatctgattctgtgtcagggcagacggttgtt
gatcctaaagggtatttgactgatcttaaaagtatgaagcttaccagtgatgcagagatt
tcagatattaagaaggctaggctgctattaaaatctgtcatacaaaccaatccaaagcat
ccgcctggttggatagcagctgcaaggctagaggaggttgctggcaagattaaagaggct
agattgttaattgagaagggatgtgaggagtgtcccaagaacgaggatgtttggctggag
gcctgtcgtttggcaaaccctgatgacgccaaggctgtgatggctaggggagttaaaatg
attccaacttctgtgaagttgtggcttcaggctgctaaattggagcaagatcatgtacaa
aagagtagggtgctaaggaaggggcttgaacatatagctagttctgtgaggctgtggaag
gcagttattgagcttgctgatgaggagcaagctagcatattactttatagggctgtggag
tcctgccccttgcaagtagaattctggcttgctcttgctaggctggaaacatatgatacg
gcaaagaaagtgctaaacagggccaggttgtatctcccaaaagagtcagctatttggatt
actgcagcaaagttggaggaagctaatggtaatattacaatggttgagaagatcatagac
aggggtatcagggccctacaaagagagggagttgtcatcaacagagaagcttggatgaaa
gaagctgaggctgctgagcgtgctgggtctgttgtcacctgccaagctataattaaacac
actgttggtgttggggttgaggaagaagataggaagagaacatgggtagctgatgctgaa
gaatgcaagaagagagggtctgttgaaactgcaagggctatatacgctcatgctatttct
gtcttcttgacaaagaagagtatatggcttaaagcagcacaactggagaagagtcatgga
actaaggattctcttgatgccttgttacggagagcagttacttatgtgccccaagctgaa
gttctttggcttatgggtgctaaagaaaaatggattgctggtgatgtgcctgctgctcga
gcaatcctccaggaagcttatgcagctattccaaactctgaggagatttggcttgctgct
ttcaaacttgaatttgaaaaccatgaacctgaaagggcaaaaatactccttgctaaggcc
cgagaaagaggtggcagtgaaagagtatggatgaaatccgccattgcagagagagaactt
ggtaatgttgcagaagagaagaggctgcttgatgaaggcctgcaacgcttcccatcattc
ttcaagttgtggttgatgcttggacagcttcatgaacggtgtggagagctagagaaggct
aaagaagcttatgtatctggtcataaaaactgcccacaatgtattcctctatggctttca
cttgcaaaacttgaagagaagatgactggactgagtaaagctcgagcaattctaactatg
gctaggaaaaggaatcctcatagccctgatctgtggcttgctgctgttagagctgaactt
aggcacggcaacaagaaagaggctgataacttgttggcaaaggctctacaagaatgtcca
aacagtggtatattatgggcgactcaaattgagattgctcctcgccctcaacgtaaagcg
aagagctcagatgcccttactaagtgtgatcaggatccccatgtcactgctgctgtagcc
aagctgttttggcatgaccggaaggtggacaaggcaaggagctggctcaacagggcagta
acacttgctccagatgttggagatttctgggctttgtattacaaatttgaacttcagcat
ggaactgaggacttgcagaaggatgtgctgaaacgttgtgttgctgcagagcctaagcat
ggtgagaaatggcaatctatttcaaaagcaattgagaatgctcaccagcctactgaagca
atattaaagaaacttgttattgctcttgggaaggaagaaaaggctgctggaaacaaacaa
gtctga
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