Chenopodium quinoa (quinoa): 110715047
Help
Entry
110715047 CDS
T05764
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cqi
Chenopodium quinoa (quinoa)
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqi03041
]
110715047
Enzymes [BR:
cqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110715047
Spliceosome [BR:
cqi03041
]
Complex C
Other components
Complex C specific factors
110715047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
DEAD
HA2_N
AAA_30
AAA_19
T2SSE
AAA_7
Motif
Other DBs
NCBI-GeneID:
110715047
NCBI-ProteinID:
XP_021749310
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MAKFWKPGTEKPRLVEDEDGGVLFFHSSSSSSSSSFGYANNIQQQRQRLPVHKRRDAILF
LVENHATTIVVGETGSGKTTQIPQYLNEGGWADSGHVIACTQPRRLAVQSVASRVAEEMG
VKLGEEVGYVIRFEDVTTPGVTRIKFLTDGVLLREMMDDPLLSKYSVVMVDEAHERSIST
DVVLGLLKKIQRRRPELRLIISSATIEAKSIASFFRVSKKQRGGAGDELGPKTEPAIISV
EGRGFTVEINYVQEPVADYLRAAVSTVMLIHKQQTVGDILVFLTGQDDIDAAVQLLNEEA
QSSDRSSGELLALPLYSGLSRAEQDLIFSPTPRGKRKVIISTNIAETSLTLEGIVYVVDS
GFSKQRFYDPLSDIENLVVAPISKASARQRTGRAGRVRPGKCYRLYTEEYYVNEMPAEGI
PEMQRSNLVSCVIQLKALGIDNILNFGWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPT
GFQVAEIPLDPMLSKALLVSNELGCSEEMLTIASVLSVQSIWISVRGAQKQLDEAKLRFA
AAEGDHVTFLNVYKGFLQSGKSSKWCHKNFINYHAMKKVLETREQLKRTAQRLGIVLKSC
DRDIQVVRKAITAGFFANACHLQTYSHEGKYKTVRTSQDVYIHPSSVLFRVNPKWVVYYS
LISTDRRYMRNVVTIDPTWLVEVAPHYYQYQGPGSSATLPR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttctggaagcctggaaccgagaaacctcgactggtagaagacgaagatggc
ggcgttctcttcttccattcttcctcttcatcttcatcttccagcttcggatacgccaac
aacatccagcagcagcgccagcgcctgccggtgcataagcgcagagacgccattctcttt
ctagttgaaaatcatgctactaccattgttgtcggcgaaactggcagcggaaaaactact
caaattcctcagtatttgaatgaaggaggatgggctgattctggtcatgttattgcttgc
actcagcctcgccgtctcgctgttcagtcagttgcttcaagggttgctgaagaaatgggt
gttaaacttggcgaggaggttggatatgtaatcagatttgaagatgtaacaactccgggt
gttaccagaattaagtttcttactgatggagtgttgctgagggaaatgatggatgatcct
cttctgtccaagtacagtgttgtcatggtagatgaagcacatgaaaggtctatttcaact
gatgttgtacttggtctcttgaaaaagattcaaaggcgtaggcctgaactgcgtttgatt
atatcatctgctactattgaagcaaaatccatagcttctttcttcagagttagtaagaag
cagcgaggaggagctggtgacgaacttgggccaaagacagaacctgccattatctcagtt
gagggaagaggctttactgttgaaataaattatgttcaggagccggttgcagactatctt
cgagctgctgtatcaactgttatgttgatacacaaacagcaaacagtgggtgatatcctt
gtattccttacgggtcaagatgatattgatgcagctgttcagctgcttaacgaagaagct
cagagttctgatagaagctcaggagaattgctcgctctgcctttatactccggactttca
cgtgctgagcaggacttgatcttttctcctactcctagagggaaaaggaaggttataata
tcgacaaatattgcagagacatcattgactttggagggcatagtctatgttgttgatagt
ggcttctcaaaacagcgtttttatgatccgctgtcagatattgagaatttggtggtggca
cccatatcaaaggcttctgcaagacaaaggacaggtagggctggaagagtgagaccaggg
aaatgttacaggttatataccgaggaatattatgttaatgaaatgccagctgaggggatt
cctgagatgcagagatcaaaccttgtctcctgcgttatacagttgaaggctctaggaatt
gataatatcttgaattttgggtggcccgcatcaccatcaccagaagctatgattagagct
cttgaagtattgtactctctaggtgtgcttgatgatgatgccaagctcacttcacctact
ggattccaagttgctgaaattccactggatcccatgctttcaaaggctttgcttgtgtct
aatgaactagggtgttcagaggaaatgcttactattgcatcagttctttctgtacagtca
atctggatctctgtaaggggagcacagaagcagctagatgaagccaagctccgatttgct
gctgctgagggtgaccatgtgactttcctaaatgtgtacaaaggatttctgcagtccggc
aaatcatcaaaatggtgtcacaagaactttattaactatcatgctatgaaaaaagttctg
gagaccagagaacaactcaaaagaacggcacagcggctgggtatagtcttgaaatcttgt
gacagagatatacaggttgtaagaaaggcaataactgctggattttttgctaatgcttgt
catttgcaaacatacagtcatgaaggaaaatacaagactgtccgtacttctcaggatgtt
tatatccacccttcatctgttttgttcagagtcaacccaaagtgggttgtatactattct
ctcatctcgactgatcgtcgatacatgcgcaatgttgtgacaatagatcctacatggctt
gtagaggttgccccgcattattatcagtatcaagggcctggttccagtgctactttgcct
aggtaa
DBGET
integrated database retrieval system
