Chenopodium quinoa (quinoa): 110715477
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Entry
110715477 CDS
T05764
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110715477
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cqi01009
]
110715477
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110715477
03036 Chromosome and associated proteins [BR:
cqi03036
]
110715477
Protein phosphatases and associated proteins [BR:
cqi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110715477
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110715477
Chromosome and associated proteins [BR:
cqi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110715477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
110715477
NCBI-ProteinID:
XP_021749750
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MKGGGGGGSGGGDIGMGLPPPPLDWKFSQVFGERTAGEEIQEVDIISAIEFDKTGDHLAT
GDRGGRVVLFERTDRKGHGGPRRDLEKMDCSPSRHPEFRYQTEFQSHEPEFDYLKSLEIE
EKINKIRWCQMANGALFLLSTNDKTIKFWKVQEKKIKKVCSVNVDPSKIERSSSTGSKGI
PNGGFNVKPTNCLSTDFSFPSGGVASLRLPTVVTSQETSLTASCRRVYGHAHDYHINSIS
NNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAY
SSSKGSIRLIDLRQSALCDSHSKLFEVQETPGSRSFFTEIIASISDVKFAKDGRYMLSRD
YMSLKLWDINMDSGPVATFQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRAATGSYSN
LFRVFGCSSGSTEASTLEASKNPMRKQLPASTNHRPSRTGTFTRGARQGSESPGSDANGN
AFDFNMKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggcggtggtggtggcagtggcggcggcgatataggaatggggttgccgccg
ccgccgttggattggaagttctctcaagtatttggggagagaactgctggtgaagagatt
caagaagttgatattatatcagctattgaatttgacaagactggggaccaccttgctact
ggagatcgcgggggccgggttgttttgtttgagagaaccgacagaaagggtcatggtgga
cctagaagagatcttgaaaagatggattgttcacctagtaggcatcctgagtttcgctat
cagactgagtttcagagccatgaaccagagtttgactacctaaagagtttagagattgag
gagaaaattaataagatcagatggtgtcagatggctaatggcgcactatttcttctttcc
actaatgacaaaaccatcaaattctggaaggttcaagagaagaaaatcaagaaggtgtgc
agtgtgaatgtggatccatcaaagattgaacgaagctcttcgacaggttccaaaggcatt
ccaaatggaggatttaatgtcaaaccaaccaattgtttgagcactgacttttcgttcccg
tctggtggcgttgcatcactacgcttacccacggtagtaactagtcaagaaacaagtctt
acggcaagttgtagaagagtatatggtcatgcccacgactatcatatcaattctatttca
aataacagtgatggagagacctttatttcggctgatgacctccgcataaatctctggaac
ttggaaattagcagtcaaagtttcaatattgttgatgttaagcctgcaaacatggaggat
ctaactgaggtgataacttcagccgaatttcaccctacccactgcaacaccttagcatat
agtagctcaaagggttctatccgactaattgacctacggcagtctgctttatgcgatagt
catagcaagctgtttgaggtgcaggagactcctggttcaagatcctttttcactgagata
attgcttcaatttcagatgtcaaatttgcaaaagatggtagatacatgctcagtcgtgac
tatatgtctctgaagctatgggatataaatatggattctgggcctgttgcaactttccag
gttcatgaacatttgagaccaaggctctgtgatttgtatgaaaatgactccatttttgac
aaatttgagtgctgtctgagtggagacggattgcgagcagcaactggttcttacagcaat
ttgtttcgtgtctttggctgctcttcgggcagcacagaagcctcaaccttggaagccagc
aaaaaccccatgaggaagcaacttccagccagtacaaaccatagaccctcaagaactggc
acctttacacgtggtgcgaggcaaggatcggagagtcctggaagtgatgcaaatggaaat
gcttttgatttcaacatgaagttgcttcatttagcatggcaccccacagaaaactcaatt
gcatgtgctgctgctaacagcctgtatatgtattatgcctag
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integrated database retrieval system
