Chenopodium quinoa (quinoa): 110716436
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Entry
110716436 CDS
T05764
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110716436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqi04131
]
110716436
Membrane trafficking [BR:
cqi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110716436
Hops complex
110716436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
RPN1_RPN2_N
zf-C3HC4
Nup54_57_C
zf-RING_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110716436
NCBI-ProteinID:
XP_021750743
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MDSGSKVFTVDLLERYAAKGHGVVTCMAAGNDVTMWGTSKGWIIRHDFGLGDSYGIDLCG
GRTGDQSIHSVFVDPGGSHCIATIVGDGGAETFYIHAKWSKPRALSKLKGLVVNAVAWNR
QHITEASTKEIILGTNNGQLHEMAVDEKDKREKYIKLLYELSELPEAFMGLQMETASIST
GTRYYVMAVTPRRLYTFTGIGSLESVFLGYQDRAVRFMELPGENLSSELHFFIKQKRAIH
FAWLSGAGIYHGDLNFGASHSSQDGDENFVENKALLDYSKLFDGAEAVKPSSLAISEYHF
LLLVGNKVKVVNRISEQIIEELHFHLTSESSSKGILGLCSDASAGLFYAYDQNSIFQVSV
NDEGRDMWKVYLDMKEYAAALANCRDALQRDQVYLAQAEVAFSTKDFLRAASFFAKINYI
LSFEEITLKFISANEQDALRTFLLWKVDSLSKDDKCQITMISTWATELYLDKINRLLLED
DTSGDHNSEYWSLIKEFRAFLSDSKDVLDEATTLMLLESYGRVDELVYFASLKGQYEIVI
HHYIQQGEAKKALEVLEKLGVPIHLQYKFAPDLIMLDAYETVESWMIRKDLNPRKLIPAM
MRYSSEPHAKNETHQVIRYLEYCVHSLNNEDPGIHNLLLSLYAKQEDDSALLRFLQSKFS
KVRENSPEFFYDPKYALRLCLKEKRMRACVHIYGMMSMHEEAVALALQVDPELAMAEADK
VEDDEELRKKLWLMIAKHVVGQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI
DDFREAICSSLEDYNKQIELLKEEMNDATQGADNIRNDIGALAQRYAIIERDEECGVCQR
RILNTAADFGISRGYASLGPMAPFYVFPCGHAFHAQCLIAHITQCTDPEKAEHILDLQKQ
LSLVSGETRRDSDGSLTVHEPVASMNQVDKIRSQLDEEIASECPFCGELMIQEISLPFIL
PEEHEVNSWEIKLLNPTNQKSISLSV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggattcagggagcaaagtatttacggtagatttgcttgaaaggtatgctgctaaaggc
catggagttgttacttgtatggctgctggtaatgatgtcaccatgtggggtaccagcaaa
ggctggatcatccgacatgattttggactcggagattcctatggtattgatctctgtggt
ggtcgaaccggggatcagtctatccacagtgtttttgtggatcctggcgggagtcactgc
attgcgacaattgttggtgatggaggtgctgaaacattctacattcatgcgaaatggagc
aaacctcgtgccttgagtaaactaaaaggccttgttgtcaatgctgttgcttggaatcga
caacacattacggaagcttccacaaaggaaatcattcttggtactaataatggtcagctt
catgagatggctgtggatgagaaggataaaagagaaaagtacattaaacttctgtatgaa
ctttcagaacttcctgaagcttttatgggattgcagatggaaacagctagcattagcaca
ggtactaggtattatgtgatggctgtcactcctaggcggctttatacgtttacaggaatt
gggtcattggagagtgtcttcttgggttaccaagatcgagcagtgcgcttcatggaactt
ccaggtgaaaatctcagtagtgagctgcatttttttataaagcagaaaagagcaattcat
tttgcttggctctcaggagcaggaatctaccatggtgacttgaactttggagcaagccat
agttcacaggatggagatgaaaattttgtggagaataaggcactgctggattattctaag
ttatttgatggtgctgaagcagttaaaccaagttctttggcaatctcagaataccatttc
ttgcttcttgttggtaataaagttaaggttgtgaaccgaattagtgaacagatcattgag
gaacttcactttcacctaacatccgagtcatcatcaaagggcattctaggtctttgtagt
gatgcttctgctggtctgttttatgcatacgaccagaactctatctttcaggtttctgtt
aatgatgaaggccgagatatgtggaaagtttatttggacatgaaggaatatgcagcagct
ttggcaaattgtcgtgatgcattgcagagagatcaagtctatctagcacaggctgaagtt
gctttctccaccaaggactttctgagagctgcatctttctttgcaaagatcaattatata
ctctcgtttgaagaaatcactttgaagttcattagtgcaaatgaacaggatgctttaagg
acctttttgctgtggaaagttgacagtctttcaaaagatgataaatgccaaataacgatg
atttccacatgggccactgaattatacttggataagatcaatcggcttttattggaagat
gatacttcaggtgatcataattccgagtattggtcacttatcaaagaattccgtgctttt
ctaagtgattctaaggatgtgttggatgaagccaccacattgatgttattagagagctat
ggtagggttgatgaattggtgtacttcgctagtttgaaggggcagtatgagattgttatt
caccattatattcagcaaggagaggcaaagaaagctttggaagttcttgaaaaacttggt
gttcccattcatttgcagtacaaatttgctcctgacctcatcatgctcgacgcttatgaa
actgttgaatcatggatgataagaaaggaccttaatccaaggaagctgattcctgcaatg
atgcgttattcaagtgaaccacatgcaaagaatgagacacatcaagtgatcagatatttg
gagtattgtgttcatagtttgaataatgaggatcctggaattcacaacctgctgctttct
ttgtatgctaaacaggaggatgatagtgctctcctgcgttttctacaatccaagttcagt
aaagtaagggaaaacagtccagaattcttctatgatcctaaatatgctttaagactttgc
cttaaggagaagaggatgcgtgcctgtgttcatatatacggtatgatgtccatgcacgaa
gaagctgtggctcttgctttacaggttgacccagagcttgcaatggctgaagctgacaag
gttgaagatgatgaagaattaaggaagaaactctggctcatgattgcaaagcatgttgtt
gggcaagaaaagggggctaagagggagaatatacgaaaagcaatcgctttcctcaaggaa
acagatggcctcctgaagatagaggatatattacctttttttccagactttgctttaatc
gatgatttcagggaggcgatttgttcatcactggaagattacaataaacaaattgaacta
ctaaaggaggagatgaatgatgcaacacaaggagcagataatattagaaatgatatcggt
gcccttgctcaaagatatgcaatcattgagcgtgatgaggaatgtggggtttgccaacga
agaatcttaaatacagctgcagattttggtatttcaaggggctatgcgtctcttgggcct
atggctcctttctatgtttttccatgtggtcatgcttttcatgcacaatgcttgattgct
catatcactcagtgcactgatcctgaaaaagcggagcatatacttgatctacaaaagcaa
ttgtctttggtgagtggtgaaacaagaagagattctgatggtagcctaactgttcatgaa
cctgttgccagcatgaaccaagtagataagatacgttcccaattggatgaagaaattgca
agtgaatgcccgttttgtggtgagttgatgatccaggagatatctttgccattcattctc
cctgaagaacatgaggtcaattcttgggagataaaactgcttaatcccactaaccagaag
agcatttcgttgtctgtttaa
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